RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 CCDC120Q96HB5 630 aa17.43■□□□□ 0.38
SPOP-220ENST00000515508 RBSNQ9H1K0 784 aa17.43■□□□□ 0.38
SPOP-220ENST00000515508 RUBCNLQ9H714 662 aa17.43■□□□□ 0.38
SPOP-220ENST00000515508 SUCOQ9UBS9 1254 aaKnown RBP17.43■□□□□ 0.38
SPOP-220ENST00000515508 MKL2Q9ULH7 1088 aa17.43■□□□□ 0.38
SPOP-220ENST00000515508 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
SPOP-220ENST00000515508 SCN2AQ99250 2005 aa17.43■□□□□ 0.38
SPOP-220ENST00000515508 CELSR1Q9NYQ6 3014 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 E5RI56 91 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 PRAMEF2O60811 474 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 C8orf89P0DMQ9 161 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 GRNP28799 593 aaKnown RBP17.42■□□□□ 0.38
SPOP-220ENST00000515508 CA7P43166 264 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 CLCN7P51798 805 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 TSTA3Q13630 321 aaPredicted RBP17.42■□□□□ 0.38
SPOP-220ENST00000515508 ABHD17BQ5VST6 288 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 TMEM207Q6UWW9 146 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 LRRC56Q8IYG6 542 aaPredicted RBP17.42■□□□□ 0.38
SPOP-220ENST00000515508 PPFIBP2Q8ND30 876 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 TSGA10Q9BZW7 698 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 SEC14L3Q9UDX4 400 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 VPS9D1Q9Y2B5 631 aa17.42■□□□□ 0.38
SPOP-220ENST00000515508 ADGRG4Q8IZF6 3080 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 TRGV8A0A0C4DH27 118 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 H0YIG0 161 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 SMAPO00193 183 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 HAT1O14929 419 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 SNRPNP63162 240 aaKnown RBP17.41■□□□□ 0.38
SPOP-220ENST00000515508 MAT1AQ00266 395 aaKnown RBP17.41■□□□□ 0.38
SPOP-220ENST00000515508 NDUFA9Q16795 377 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 MEI1Q5TIA1 1274 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 MTFR2Q6P444 385 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 RPTNQ6XPR3 784 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 BNC2Q6ZN30 1099 aaPredicted RBP17.41■□□□□ 0.38
SPOP-220ENST00000515508 ZNF808Q8N4W9 903 aaPredicted RBP17.41■□□□□ 0.38
SPOP-220ENST00000515508 AMER2Q8N7J2 671 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 GIMAP7Q8NHV1 300 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 SUN3Q8TAQ9 357 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 SLC30A3Q99726 388 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 VN1R1Q9GZP7 353 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 INTS10Q9NVR2 710 aaKnown RBP17.41■□□□□ 0.38
SPOP-220ENST00000515508 KLHL42Q9P2K6 505 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 TEKT2Q9UIF3 430 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 MED16Q9Y2X0 877 aa17.41■□□□□ 0.38
SPOP-220ENST00000515508 NCOA6Q14686 2063 aaPredicted RBP17.41■□□□□ 0.38
SPOP-220ENST00000515508 TCRBV7S3A2A0A539 114 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 NSA2O95478 260 aaKnown RBP17.4■□□□□ 0.38
SPOP-220ENST00000515508 MYBL2P10244 700 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 PAMP19021 973 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 POU3F2P20265 443 aaPredicted RBP17.4■□□□□ 0.38
SPOP-220ENST00000515508 PTGER4P35408 488 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 SKIV2L2P42285 1042 aaKnown RBP17.4■□□□□ 0.38
SPOP-220ENST00000515508 AVPR1BP47901 424 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 ZNF33BQ06732 778 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 RPS6KA1Q15418 735 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 LONRF1Q17RB8 773 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 TTLL9Q3SXZ7 439 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 PLAG1Q6DJT9 500 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 GSTA5Q7RTV2 222 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 PLD3Q8IV08 490 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 METTL21AQ8WXB1 218 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 ASB11Q8WXH4 323 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 EBNA1BP2Q99848 306 aaKnown RBP17.4■□□□□ 0.38
SPOP-220ENST00000515508 GUCA1BQ9UMX6 200 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 PCDHGB6Q9Y5F9 930 aa17.4■□□□□ 0.38
SPOP-220ENST00000515508 PKDREJQ9NTG1 2253 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 GFYI3L273 518 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 CCL21O00585 134 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 SEC24DO94855 1032 aaPredicted RBP17.39■□□□□ 0.37
SPOP-220ENST00000515508 MPC1LP0DKB6 136 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 MAGEA6P43360 314 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 ZNF630Q2M218 657 aaPredicted RBP17.39■□□□□ 0.37
SPOP-220ENST00000515508 H3F3CQ6NXT2 135 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 LANCL3Q6ZV70 420 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 VN1R4Q7Z5H5 301 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 ADCK2Q7Z695 626 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 MRGPRGQ86SM5 289 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 OR9A4Q8NGU2 314 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 KCNJ9Q92806 393 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 CHST11Q9NPF2 352 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 STMN3Q9NZ72 180 aa17.39■□□□□ 0.37
SPOP-220ENST00000515508 C19orf25Q9UFG5 118 aaPredicted RBP17.39■□□□□ 0.37
SPOP-220ENST00000515508 KCNE1BA0A087WTH5 132 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 H7BY64 318 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 AVILO75366 819 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 ENO3P13929 434 aaPredicted RBP17.38■□□□□ 0.37
SPOP-220ENST00000515508 IMPA1P29218 277 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 KCNJ1P48048 391 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 RPS15AP62244 130 aaKnown RBP17.38■□□□□ 0.37
SPOP-220ENST00000515508 PMP22Q01453 160 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 SRSF11Q05519 484 aaKnown RBP17.38■□□□□ 0.37
SPOP-220ENST00000515508 RBPJQ06330 500 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 CUL1Q13616 776 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 ZNF766Q5HY98 468 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 ZNF470Q6ECI4 717 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 PRSS41Q7RTY9 318 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 GDF7Q7Z4P5 450 aa17.38■□□□□ 0.37
SPOP-220ENST00000515508 CPEB2Q7Z5Q1 589 aaKnown RBP17.38■□□□□ 0.37
SPOP-220ENST00000515508 PCGF5Q86SE9 256 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms