RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MAP3K7O43318 606 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 KIF1CO43896 1103 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 FTH1P19P0C7X4 201 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 NEFHP12036 1026 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 ST6GAL1P15907 406 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 NELFEP18615 380 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 CD22P20273 847 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 GRK3P35626 688 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 AHRP35869 848 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 GABRA4P48169 554 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 HK2P52789 917 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 ERVPABLB-1P60509 514 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 RPS15AP62244 130 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 HSD11B2P80365 405 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 RBBP7Q16576 425 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 TUBB8Q3ZCM7 444 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 XKR6Q5GH73 641 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 CATSPEREQ5SY80 951 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 CACHD1Q5VU97 1274 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 LETMD1Q6P1Q0 360 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 ATG14Q6ZNE5 492 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 FAM92BQ6ZTR7 304 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 RPS27LQ71UM5 84 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 MILR1Q7Z6M3 343 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 MTERF4Q7Z6M4 381 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 TMPRSS11BQ86T26 416 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 SYVN1Q86TM6 617 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 SLCO6A1Q86UG4 719 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 TRIM73Q86UV7 250 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 KRT78Q8N1N4 520 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 DNAJC22Q8N4W6 341 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 TBC1D19Q8N5T2 526 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 TTLQ8NG68 377 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 OR4F6Q8NGB9 312 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 LRRC8CQ8TDW0 803 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 ATP6V1E2Q96A05 226 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 REPS1Q96D71 796 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 MOCOSQ96EN8 888 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF285Q96NJ3 590 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 PRAP1Q96NZ9 151 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 SORT1Q99523 831 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 RHBGQ9H310 441 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 TMEM9Q9P0T7 183 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 ADGRE2Q9UHX3 823 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 ATXN7L1Q9ULK2 861 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 PCDHGA11Q9Y5H2 935 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 A0A1B0GTL3 188 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 SLC9B1P1A6NJY1 282 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 PPP6CO00743 305 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 CASC3O15234 703 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 SRPX2O60687 465 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 KCNK5O95279 499 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 CHRNGP07510 517 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 UROSP10746 265 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 HGFP14210 728 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 PIK3CBP42338 1070 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 ZIC1Q15915 447 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 HIST2H2ACQ16777 129 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 ZC3H12BQ5HYM0 836 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 MANEAQ5SRI9 462 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 HIST2H2AA3Q6FI13 130 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 FBXO42Q6P3S6 717 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 TMIGD1Q6UXZ0 262 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 CUZD1Q86UP6 607 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 DCBLD1Q8N8Z6 715 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 WDR20Q8TBZ3 569 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 LIN37Q96GY3 246 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 CCDC74BQ96LY2 380 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 PPM1MQ96MI6 270 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 OR2A5Q96R48 311 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 CCT7Q99832 543 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 ZFYVE21Q9BQ24 234 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 C20orf27Q9GZN8 174 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 ILKAPQ9H0C8 392 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 SPNS1Q9H2V7 528 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 PDE7BQ9NP56 450 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 MID1IP1Q9NPA3 183 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 ABCF3Q9NUQ8 709 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF490Q9ULM2 529 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 RNF11Q9Y3C5 154 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 AP1M2Q9Y6Q5 423 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
PDLIM5-220ENST00000514830 FOXE1O00358 373 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 HAT1O14929 419 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 AZIN1O14977 448 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 ITM2AO43736 263 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 CTSVO60911 334 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 RASSF9O75901 435 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 OR4F21O95013 312 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 HSPA4LO95757 839 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 MT-CO3P00414 261 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 HSD3B1P14060 373 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 PVRP15151 417 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 HSD3B2P26439 372 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 VARSP26640 1264 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 CCR10P46092 362 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 SCTRP47872 440 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 RPL14P50914 215 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 NOVA1P51513 510 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms