RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 ALDH6A1Q02252 535 aaKnown RBP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 SF1Q15637 639 aaKnown RBP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 CTF1Q16619 201 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 ZC3H12BQ5HYM0 836 aaKnown RBP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 SUSD1Q6UWL2 747 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 BARD1Q99728 777 aaKnown RBP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 SLC32A1Q9H598 525 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 MS4A12Q9NXJ0 267 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 SSR3Q9UNL2 185 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 FAM25AB3EWG3 89 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 FAM25CB3EWG5 89 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 FAM25GB3EWG6 89 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 KIAA0513O60268 411 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 TACR1P25103 407 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 SERPINA4P29622 427 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 QPRTQ15274 297 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 DUOXA1Q1HG43 343 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 ZNF181Q2M3W8 571 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 XKR4Q5GH76 650 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 GALNT7Q86SF2 657 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 OR5AK3PQ8NH89 298 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 PIK3R3Q92569 461 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 POP5Q969H6 163 aaKnown RBP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 SLC30A2Q9BRI3 323 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 C2orf49Q9BVC5 232 aaPredicted RBP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 OR2AG2A6NM03 316 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 M0QX08 132 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 OR7A17O14581 309 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 WNT9AO14904 365 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 NUAK1O60285 661 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 PRPS1L1P21108 318 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 EPHA2P29317 976 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 OR1D2P34982 312 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 HNF4AP41235 474 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 FRG2Q64ET8 278 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 ADCK2Q7Z695 626 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 GPR149Q86SP6 731 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 RNF175Q8N4F7 328 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 FRG2BQ96QU4 278 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 TMEM246Q9BRR3 403 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 ZDHHC6Q9H6R6 413 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 TRPC4Q9UBN4 977 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 CFL2Q9Y281 166 aa13.47□□□□□ -0.25
TSPAN17-208ENST00000514705 ANKDD1BA6NHY2 528 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 AGAP5A6NIR3 686 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 CKMT1AP12532 417 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 CSNK2BP67870 215 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 ZNF45Q02386 682 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 UAP1L1Q3KQV9 507 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 MANEALQ5VSG8 457 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 NEK5Q6P3R8 708 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 PLET1Q6UQ28 207 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 DEF8Q6ZN54 512 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 COL21A1Q96P44 957 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 IGSF6O95976 241 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 TIE1P35590 1138 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 SRSF11Q05519 484 aaKnown RBP13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 TBRG1Q3YBR2 411 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 PRSS55Q6UWB4 352 aaPredicted RBP13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 SNX20Q7Z614 316 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 TMCO6Q96DC7 493 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 BRD9Q9H8M2 597 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 BOLA1Q9Y3E2 137 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 PCDHGB6Q9Y5F9 930 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 GJB5O95377 273 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 HOXC13P31276 330 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 SPAM1P38567 509 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 VLDLRP98155 873 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 PCBP2Q15366 365 aaKnown RBP eCLIP13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 BHLHA9Q7RTU4 235 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 APIPQ96GX9 242 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 ZNF558Q96NG5 402 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 MAGIXQ9H6Y5 334 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 PAQR5Q9NXK6 330 aaPredicted RBP13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 SATB2Q9UPW6 733 aa13.46□□□□□ -0.25
TSPAN17-208ENST00000514705 ITGA2P17301 1181 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 MYL12AP19105 171 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 CDKN2CP42773 168 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 LBX1P52954 281 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 SCN1BQ07699 218 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 IFI44LQ53G44 452 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 HIST2H2AA3Q6FI13 130 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 NOXRED1Q6NXP6 359 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 SERINC5Q86VE9 423 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 OR4K1Q8NGD4 311 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 POLR2J2Q9GZM3 115 aaKnown RBP13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 RNF167Q9H6Y7 350 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 LTBP1Q14766 1721 aa13.46□□□□□ -0.26
TSPAN17-208ENST00000514705 CTDSP2O14595 271 aa13.45□□□□□ -0.26
TSPAN17-208ENST00000514705 TPST2O60704 377 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms