RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 OR13J1Q8NGT2 312 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 ACTL9Q8TC94 416 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 ALS2CR12Q96Q35 445 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 ACAT2Q9BWD1 397 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 TP63Q9H3D4 680 aaPredicted RBP10.31□□□□□ -0.76
DDX41-216ENST00000513562 LRRC40Q9H9A6 602 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 ZNF358Q9NW07 568 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 SPATA7Q9P0W8 599 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 TTC7AQ9ULT0 858 aaPredicted RBP10.31□□□□□ -0.76
DDX41-216ENST00000513562 L3MBTL1Q9Y468 752 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.765e-7■□□□□ 10.5
DDX41-216ENST00000513562 MRFAP1Q9Y605 127 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 NFS1Q9Y697 457 aa10.31□□□□□ -0.76
DDX41-216ENST00000513562 SOWAHDA6NJG2 315 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 TXNDC9O14530 226 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 P2RX6O15547 441 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 PROM1O43490 865 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 AKR1B10O60218 316 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 RBP3P10745 1247 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 ERGP11308 486 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 CCNFP41002 786 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 AGTR2P50052 363 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 SNRPNP63162 240 aaKnown RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 PTK6Q13882 451 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 IQCB1Q15051 598 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 TMED2Q15363 201 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 MINDY4Q4G0A6 757 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 ZNF468Q5VIY5 522 aaPredicted RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 ZNF425Q6IV72 752 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 AFTPHQ6ULP2 937 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 TAOK1Q7L7X3 1001 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 ZNF227Q86WZ6 799 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 CCDC71Q8IV32 467 aaPredicted RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 SHISA5Q8N114 240 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 POGLUT1Q8NBL1 392 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 RERGQ96A58 199 aaPredicted RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 SEC16BQ96JE7 1060 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 TTC1Q99614 292 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 TRIM45Q9H8W5 580 aaPredicted RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 MRPS30Q9NP92 439 aaKnown RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 PLSCR2Q9NRY7 297 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 PIH1D1Q9NWS0 290 aaKnown RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 RUVBL2Q9Y230 463 aaKnown RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 ALG6Q9Y672 507 aa10.3□□□□□ -0.76
DDX41-216ENST00000513562 PRRC2AP48634 2157 aaKnown RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 SNRNP200O75643 2136 aaKnown RBP10.3□□□□□ -0.76
DDX41-216ENST00000513562 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 H0YIG0 161 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 TFECO14948 347 aaPredicted RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 GOT2P00505 430 aaKnown RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 PKMP14618 531 aaKnown RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 EZRP15311 586 aaKnown RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 TFEBP19484 476 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 DNASE1P24855 282 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 AVPR1BP47901 424 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 UBASH3AP57075 661 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 TAS2R50P59544 299 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 EIF3EP60228 445 aaKnown RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 RELAQ04206 551 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 SEMA3AQ14563 771 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 PARP6Q2NL67 630 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 SKOR2Q2VWA4 1001 aaPredicted RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 CCDC38Q502W7 563 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 CMPK2Q5EBM0 449 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 MFSD4BQ5TF39 518 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 CCDC181Q5TID7 509 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 PAPD4Q6PIY7 484 aaKnown RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 ZNF534Q76KX8 674 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 PCGF5Q86SE9 256 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 KRT222Q8N1A0 295 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 MYRIPQ8NFW9 859 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 OR9A4Q8NGU2 314 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 GSDMBQ8TAX9 411 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 RMND5BQ96G75 393 aaPredicted RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 DNAJC7Q99615 494 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 MDFIQ99750 246 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 SMR3AQ99954 134 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 POLDIP3Q9BY77 421 aaKnown RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 CLEC4MQ9H2X3 399 aaPredicted RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 GOLPH3Q9H4A6 298 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 SPTLC3Q9NUV7 552 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 PLEKHA6Q9Y2H5 1048 aa10.29□□□□□ -0.76
DDX41-216ENST00000513562 FLNAP21333 2647 aaKnown RBP10.29□□□□□ -0.76
DDX41-216ENST00000513562 NSD1Q96L73 2696 aaPredicted RBP10.28□□□□□ -0.76
DDX41-216ENST00000513562 OR2W5A6NFC9 320 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 USP27XA6NNY8 438 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 NDC80O14777 642 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 PJA2O43164 708 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 CDC40O60508 579 aaKnown RBP eCLIP10.28□□□□□ -0.76
DDX41-216ENST00000513562 NSA2O95478 260 aaKnown RBP10.28□□□□□ -0.76
DDX41-216ENST00000513562 METTL18O95568 372 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 TPP2P29144 1249 aaPredicted RBP10.28□□□□□ -0.76
DDX41-216ENST00000513562 TRHRP34981 398 aaPredicted RBP10.28□□□□□ -0.76
DDX41-216ENST00000513562 XCR1P46094 333 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 CYB561P49447 251 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 MEOX1P50221 254 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 DLX5P56178 289 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 NUP107P57740 925 aa10.28□□□□□ -0.76
DDX41-216ENST00000513562 SLC26A5P58743 744 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms