RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SLC16A5O15375 505 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 PRPF4O43172 522 aaKnown RBP eCLIP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 CNOT3O75175 753 aaKnown RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 IGHEP01854 428 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 ALPPP05187 535 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 UMODP07911 640 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 CDH1P12830 882 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 NCF1P14598 390 aaPredicted RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 ZNF37AP17032 561 aaPredicted RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 FDXRP22570 491 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 CCND1P24385 295 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 SSTR1P30872 391 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 GRK3P35626 688 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 CASRP41180 1078 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 AVPR1BP47901 424 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 MLLT10P55197 1068 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 TIAL1Q01085 375 aaKnown RBP eCLIP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 MEF2AQ02078 507 aaPredicted RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 CAV1Q03135 178 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 IGFBP7Q16270 282 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 NKG7Q16617 165 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 NDUFA9Q16795 377 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 NADK2Q4G0N4 442 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 DCAF10Q5QP82 559 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 FAAH2Q6GMR7 532 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 CAPN13Q6MZZ7 669 aaPredicted RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 C8orf74Q6P047 294 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 MRPL14Q6P1L8 145 aaKnown RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 PRMT9Q6P2P2 845 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 FBXO42Q6P3S6 717 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 COX15Q7KZN9 410 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 PPP1R32Q7Z5V6 425 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 GALNT7Q86SF2 657 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 ZC3HC1Q86WB0 502 aaKnown RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 ZCCHC10Q8TBK6 192 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 FBXO25Q8TCJ0 367 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 MRRFQ96E11 262 aaKnown RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 VPS39Q96JC1 886 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 C10orf90Q96M02 699 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 TSNARE1Q96NA8 513 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 ZNF285Q96NJ3 590 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 MACROD1Q9BQ69 325 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 NUDT9Q9BW91 350 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 TXLNGYQ9BZA5 131 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 UNKQ9C0B0 810 aaKnown RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 DRC3Q9H069 523 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 PCBD2Q9H0N5 130 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 WDR54Q9H977 334 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 GPAMQ9HCL2 828 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 SLC22A11Q9NSA0 550 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 NSMCE4AQ9NXX6 385 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 ZNF282Q9UDV7 671 aaPredicted RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 FBXL4Q9UKA2 621 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 CDC14AQ9UNH5 594 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 SH2B3Q9UQQ2 575 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 ZNF451Q9Y4E5 1061 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 KLK4Q9Y5K2 254 aa6.2□□□□□ -1.42
KDM3B-208ENST00000512928 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
KDM3B-208ENST00000512928 UBR5O95071 2799 aaPredicted RBP6.19□□□□□ -1.42
KDM3B-208ENST00000512928 NAV2Q8IVL1 2488 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 TCRBV9S1A1TA0A576 114 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 ESYT3A0FGR9 886 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 AGPSO00116 658 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 CDC7O00311 574 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 MAP2K7O14733 419 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 P2RX6O15547 441 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 NDUFS4O43181 175 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 OR1F1O43749 312 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 DPM1O60762 260 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 MED26O95402 600 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 TSPAN12O95859 305 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 ALBP02768 609 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 HEXBP07686 556 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 ENO2P09104 434 aaPredicted RBP6.19□□□□□ -1.42
KDM3B-208ENST00000512928 ZGLP1P0C6A0 271 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 SLC35G6P0C7Q6 338 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 ACPPP15309 386 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 MMP11P24347 488 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 HRH2P25021 359 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 CXCR2P25025 360 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 GCGRP47871 477 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 CSRP3P50461 194 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 CCR8P51685 355 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 AP1S2P56377 157 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 TAS2R39P59534 338 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 RPS15AP62244 130 aaKnown RBP6.19□□□□□ -1.42
KDM3B-208ENST00000512928 MAT1AQ00266 395 aaKnown RBP6.19□□□□□ -1.42
KDM3B-208ENST00000512928 SLC7A5Q01650 507 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 EEF1A2Q05639 463 aaKnown RBP6.19□□□□□ -1.42
KDM3B-208ENST00000512928 KLC1Q07866 573 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 CSHL1Q14406 222 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 USP10Q14694 798 aaKnown RBP6.19□□□□□ -1.42
KDM3B-208ENST00000512928 SLMAPQ14BN4 828 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 SYT16Q17RD7 645 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 TUBB8Q3ZCM7 444 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 VWA2Q5GFL6 755 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 ZNF425Q6IV72 752 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 C3orf62Q6ZUJ4 267 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 RAPH1Q70E73 1250 aa6.19□□□□□ -1.42
KDM3B-208ENST00000512928 ASPGQ86U10 573 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms