RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DRC3Q9H069 523 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 PCBD2Q9H0N5 130 aa11.93□□□□□ -0.5
VEGFA-216ENST00000512683 C19orf25Q9UFG5 118 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 RUVBL1Q9Y265 456 aaKnown RBP11.93□□□□□ -0.5
VEGFA-216ENST00000512683 KRT87PA6NCN2 255 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 OR5H15A6NDH6 313 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 ARHGEF33A8MVX0 844 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 PRSS44E7EML9 344 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 E7ENX8 843 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 EIF3FO00303 357 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-216ENST00000512683 ZBTB14O43829 449 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 PRAMEF2O60811 474 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 WDPCPO95876 746 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 MPC1LP0DKB6 136 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 PSMB5P28074 263 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 COILP38432 576 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-216ENST00000512683 CASP6P55212 293 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 TAP2Q03519 686 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 PTK6Q13882 451 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 KLHL38Q2WGJ6 581 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 NEPROQ6NW34 567 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 CENPUQ71F23 418 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 LMNTD2Q8IXW0 634 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 SRRM1Q8IYB3 904 aaKnown RBP11.92□□□□□ -0.5
VEGFA-216ENST00000512683 PRSS58Q8IYP2 241 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 AGGF1Q8N302 714 aaeCLIP11.92□□□□□ -0.5
VEGFA-216ENST00000512683 AMER3Q8N944 861 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 ASB11Q8WXH4 323 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 ZNF354BQ96LW1 612 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 ACAT2Q9BWD1 397 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 TMEM184CQ9NVA4 438 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 PLA2G3Q9NZ20 509 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 GALPQ9UBC7 116 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 SEC14L3Q9UDX4 400 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 MKL2Q9ULH7 1088 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 RUVBL2Q9Y230 463 aaKnown RBP11.92□□□□□ -0.5
VEGFA-216ENST00000512683 COMMD10Q9Y6G5 202 aa11.92□□□□□ -0.5
VEGFA-216ENST00000512683 DOCK10Q96BY6 2186 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 IGKV1-8A0A0C4DH67 115 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 E5RI56 91 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 GFYI3L273 518 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 FOXS1O43638 330 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 NRDCO43847 1150 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 KIF5CO60282 957 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 NIPSNAP2O75323 286 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 NSA2O95478 260 aaKnown RBP11.91□□□□□ -0.5
VEGFA-216ENST00000512683 UQCRHP07919 91 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 C8orf89P0DMQ9 161 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 MLNP12872 115 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 CA7P43166 264 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 MAGEA3P43357 314 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 AGTR2P50052 363 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 PCOLCEQ15113 449 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 ZNF630Q2M218 657 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-216ENST00000512683 PLAG1Q6DJT9 500 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 LRRC8EQ6NSJ5 796 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 CCDC137Q6PK04 289 aaKnown RBP11.91□□□□□ -0.5
VEGFA-216ENST00000512683 BNC2Q6ZN30 1099 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-216ENST00000512683 CILP2Q8IUL8 1156 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 MCEMP1Q8IX19 187 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 OTUD6BQ8N6M0 293 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 MCUQ8NE86 351 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 THAP3Q8WTV1 239 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-216ENST00000512683 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 ITLN2Q8WWU7 325 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-216ENST00000512683 KCNJ9Q92806 393 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 CYTH2Q99418 400 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 PKP4Q99569 1192 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 CRYL1Q9Y2S2 319 aa11.91□□□□□ -0.5
VEGFA-216ENST00000512683 ZCWPW2A0A1B0GU75 182 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 FAM237BA0A1B0GVD1 139 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 ARHGAP10A1A4S6 786 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SDR42E2A6NKP2 422 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SMAPO00193 183 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 PGRMC1O00264 195 aaKnown RBP11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SLC16A8O95907 504 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SKIV2L2P42285 1042 aaKnown RBP11.9□□□□□ -0.5
VEGFA-216ENST00000512683 CLCN7P51798 805 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SMSP52788 366 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 RPS15AP62244 130 aaKnown RBP11.9□□□□□ -0.5
VEGFA-216ENST00000512683 EXT1Q16394 746 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 ACSBG2Q5FVE4 666 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.9□□□□□ -0.5
VEGFA-216ENST00000512683 NIPAL1Q6NVV3 410 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 HIBCHQ6NVY1 386 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SUSD1Q6UWL2 747 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 CPEB2Q7Z5Q1 589 aaKnown RBP11.9□□□□□ -0.5
VEGFA-216ENST00000512683 MRGPRGQ86SM5 289 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 ZC3H7AQ8IWR0 971 aaKnown RBP11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SIRT6Q8N6T7 355 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 HORMAD2Q8N7B1 307 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 CAMKVQ8NCB2 501 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 M1APQ8TC57 530 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 ACTRT1Q8TDG2 376 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 FAM136AQ96C01 138 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 SERPINB12Q96P63 405 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms