RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 HSH2DQ96JZ2 352 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 FOPNLQ96NB1 174 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 TPT1P8Q9HAU6 139 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 SGK2Q9HBY8 427 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 PCDH12Q9NPG4 1184 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 PAK6Q9NQU5 681 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 ADPRHL2Q9NX46 363 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 PDP1Q9P0J1 537 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 STOX2Q9P2F5 926 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 SAMHD1Q9Y3Z3 626 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 TSPAN11A1L157 253 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 EFCAB14O75071 495 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 ATG13O75143 517 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 ADH1AP07327 375 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 ABCB1P08183 1280 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 LAMP1P11279 417 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 TIMP2P16035 220 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 POLR2EP19388 210 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 HTR1BP28222 390 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 CLK3P49761 638 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 GP2P55259 537 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 IL1RL1Q01638 556 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 MVKQ03426 396 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 EMX1Q04741 257 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 PIGFQ07326 219 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 DDX39BQ13838 428 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 SIM2Q14190 667 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 NPTX1Q15818 432 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 TRIM60Q495X7 471 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 HENMT1Q5T8I9 393 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 GALNT18Q6P9A2 607 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 SLC16A12Q6ZSM3 486 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 B3GNT8Q7Z7M8 397 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 OR56A3Q8NH54 315 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 CNIH3Q8TBE1 160 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 BTN2A2Q8WVV5 523 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 FAR1Q8WVX9 515 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 REPS1Q96D71 796 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 CXorf40BQ96DE9 158 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 C11orf24Q96F05 449 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 VPS35Q96QK1 796 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 MTERF1Q99551 399 aaKnown RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 CCM2Q9BSQ5 444 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 KRT84Q9NSB2 600 aa13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 PAK1IP1Q9NWT1 392 aaPredicted RBP13.76□□□□□ -0.21
AP003555.1-202ENST00000511013 LTBP2Q14767 1821 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 E7EQ34 232 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 ZNF197O14709 1029 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 SLC22A1O15245 554 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 INMTO95050 263 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 CXCL14O95715 111 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 C9P02748 559 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 ANXA4P09525 319 aaPredicted RBP13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 PHEXP78562 749 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 DEFB103AP81534 67 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 VLDLRP98155 873 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 ANKDD1AQ495B1 522 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 C10orf62Q5T681 223 aaPredicted RBP13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 KIAA1614Q5VZ46 1190 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 DPPA4Q7L190 304 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 PARP8Q8N3A8 854 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 RNF175Q8N4F7 328 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 ATG16L2Q8NAA4 619 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 CDC26Q8NHZ8 85 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 HCAR2Q8TDS4 363 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 CHTF18Q8WVB6 975 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 IPCEF1Q8WWN9 437 aaPredicted RBP13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 SH3KBP1Q96B97 665 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 COQ8BQ96D53 544 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 VWCEQ96DN2 955 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 MED8Q96G25 268 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 EPYCQ99645 322 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 PRM3Q9NNZ6 103 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 NECTIN3Q9NQS3 549 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 EXD2Q9NVH0 621 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 TBC1D14Q9P2M4 693 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 ERVK-18Q9QC07 812 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 TBX21Q9UL17 535 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 NDRG4Q9ULP0 352 aaKnown RBP13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 VPS4AQ9UN37 437 aa13.75□□□□□ -0.21
AP003555.1-202ENST00000511013 SLC5A10A0PJK1 596 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 MGAT4DA6NG13 374 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 OR2AG2A6NM03 316 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 GABRR3A8MPY1 467 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 MAGEB3O15480 346 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 SUV39H1O43463 412 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 XPNPEP2O43895 674 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 LEFTY1O75610 366 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 FGF18O76093 207 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 TYRP14679 529 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 PCGF2P35227 344 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 ETV3P41162 512 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 CCR3P51677 355 aa13.74□□□□□ -0.21
AP003555.1-202ENST00000511013 SLC35A2P78381 396 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms