RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 NUDCD3Q8IVD9 361 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 P3H2Q8IVL5 708 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ARID3BQ8IVW6 561 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 BRSK2Q8IWQ3 736 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 C4orf33Q8N1A6 199 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF786Q8N393 782 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ANKFN1Q8N957 763 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PJA1Q8NG27 643 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ETNPPLQ8TBG4 499 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 LRRC20Q8TCA0 184 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PIK3R3Q92569 461 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SGCDQ92629 289 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 RAD54LQ92698 747 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CD101Q93033 1021 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PPWD1Q96BP3 646 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 TMCO6Q96DC7 493 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ASB9Q96DX5 294 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 MCRS1Q96EZ8 462 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PRR11Q96HE9 360 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 THOC3Q96J01 351 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CNDP1Q96KN2 507 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 RDH12Q96NR8 316 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 DACH2Q96NX9 599 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 AGAP4Q96P64 663 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 STRBPQ96SI9 672 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PAFAH2Q99487 392 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 CDX2Q99626 313 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 AGPAT1Q99943 283 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 NUP85Q9BW27 656 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 NPLQ9BXD5 320 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 B3GNT4Q9C0J1 378 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 GLT8D2Q9H1C3 349 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 FAM83DQ9H4H8 585 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SYNDIG1Q9H7V2 258 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 POLR1BQ9H9Y6 1135 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SIAEQ9HAT2 523 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PCDH9Q9HC56 1237 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SEMA4BQ9NPR2 832 aaPredicted RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 IARS2Q9NSE4 1012 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 DDX28Q9NUL7 540 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 OLAHQ9NV23 265 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM45AQ9NWC5 275 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 PPP1R14DQ9NXH3 145 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 B3GNT2Q9NY97 397 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 KCND2Q9NZV8 630 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 GCNT4Q9P109 453 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 MOSPD1Q9UJG1 213 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 MKLN1Q9UL63 735 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 OGDHLQ9ULD0 1010 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF175Q9Y473 711 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 SNX5Q9Y5X3 404 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 STON1Q9Y6Q2 735 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 MAU2Q9Y6X3 613 aa4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 RBBP6Q7Z6E9 1792 aaKnown RBP4.45□□□□□ -1.7
PDLIM5-211ENST00000508531 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 FAM237BA0A1B0GVD1 139 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 A0A1W2PQ72 361 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 RGSL1A5PLK6 1076 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 OR5K4A6NMS3 321 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 C2orf81A6NN90 581 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 H3BMM5 538 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PAPSS1O43252 624 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 NMT2O60551 498 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 UPK1BO75841 260 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 OR7A10O76100 309 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 IFNA14P01570 189 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 MBPP02686 304 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CYP1A2P05177 515 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 MYL3P08590 195 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM225BP0DP42 221 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 COX4I1P13073 169 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF26P17031 533 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 RPS12P25398 132 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ADSSP30520 456 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 HTR7P34969 479 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PSMC2P35998 433 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ARL1P40616 181 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC26A3P40879 764 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 EIF2DP41214 584 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 RPS5P46782 204 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 NDST2P52849 883 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ARHGAP8P85298 464 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 B4GALNT1Q00973 533 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 IFITM2Q01629 132 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PRKCEQ02156 737 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 RHDQ02161 417 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 MRPL28Q13084 256 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 STX5Q13190 355 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ART3Q13508 389 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TFDP1Q14186 410 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PDK2Q15119 407 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TAB1Q15750 504 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SHROOM1Q2M3G4 852 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 RUNDC3AQ59EK9 446 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CLVS2Q5SYC1 327 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 VWA5B1Q5TIE3 1220 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PDPK2PQ6A1A2 396 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TIGD3Q6B0B8 471 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 GRHL2Q6ISB3 625 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CXorf57Q6NSI4 855 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms