RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TMEM189-UBE2V1I3L0A0 370 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLIC1O00299 241 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 FPGTO14772 594 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SYN3O14994 580 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 INPPL1O15357 1258 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARHGEF9O43307 516 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SUV39H1O43463 412 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 MITFO75030 526 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 UGT2B17O75795 530 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLITRK5O94991 958 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PGLSO95336 258 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SEMG1P04279 462 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 LCKP06239 509 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 C8GP07360 202 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 RHOCP08134 193 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SRPRAP08240 638 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANXA5P08758 320 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PIRTP0C851 137 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 DBTP11182 482 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CYP4B1P13584 511 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 GPX2P18283 190 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CR2P20023 1033 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 HOXD9P28356 352 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CD6P30203 668 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 KDELR2P33947 212 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCGF2P35227 344 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ACVRL1P37023 503 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 MAPK8P45983 427 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC15A1P46059 708 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ASMTP46597 345 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 BRCC3P46736 316 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 HSPA7P48741 367 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 HNMTP50135 292 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 C21orf58P58505 322 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDC42P60953 191 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 AP1S1P61966 158 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PLIN5Q00G26 463 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CD300CQ08708 224 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 MTAPQ13126 283 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC13A2Q13183 592 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SP140Q13342 867 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF177Q13360 481 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CAMK2GQ13555 558 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 BOP1Q14137 746 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 GBX1Q14549 363 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PTPRCAPQ14761 206 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PTGR1Q14914 329 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAM110CQ1W6H9 321 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 GPR33Q49SQ1 333 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CARD16Q5EG05 197 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 FBXO48Q5FWF7 155 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANXA8L1Q5VT79 327 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PSAPL1Q6NUJ1 521 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZCCHC8Q6NZY4 707 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SYCE2Q6PIF2 218 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 DOK6Q6PKX4 331 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 XKRXQ6PP77 449 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SBSNQ6UWP8 590 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCBE1Q6UXH8 406 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 DNAJC14Q6Y2X3 702 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLCO4C1Q6ZQN7 724 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCDC190Q86UF4 302 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 RNF130Q86XS8 419 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC44A2Q8IWA5 706 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC30A8Q8IWU4 369 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SYTL1Q8IYJ3 562 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 RGL4Q8IZJ4 473 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 METTL4Q8N3J2 472 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 DNAJC22Q8N4W6 341 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PARP16Q8N5Y8 322 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZBTB2Q8N680 514 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 EFHBQ8N7U6 833 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ASCC1Q8N9N2 400 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 MDGA1Q8NFP4 955 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF675Q8TD23 568 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 C2orf15Q8WU43 125 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SELENOMQ8WWX9 145 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 MYO19Q96H55 970 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 HSH2DQ96JZ2 352 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SPATA17Q96L03 361 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 Q96MT0 163 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 DEPDC7Q96QD5 511 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 MAPKAP1Q9BPZ7 522 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC30A2Q9BRI3 323 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SPON2Q9BUD6 331 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 HTATIP2Q9BUP3 242 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 BTBD2Q9BX70 525 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDCA4Q9BXL8 241 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 GPR63Q9BZJ6 419 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 REXO4Q9GZR2 422 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 TMEM245Q9H330 911 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 TP63Q9H3D4 680 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC32A1Q9H598 525 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 IKZF5Q9H5V7 419 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 NSUN3Q9H649 340 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 RRAGCQ9HB90 399 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZFP14Q9HCL3 533 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 SERHLQ9NQF3 203 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 DDX28Q9NUL7 540 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms