RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 FKBP9O95302 570 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 LDOC1O95751 146 aaPredicted RBP16.77■□□□□ 0.28
RNF4-209ENST00000507784 PVRP15151 417 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 MAGP20916 626 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 CAPZBP47756 277 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 E2F2Q14209 437 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 LSM12Q3MHD2 195 aaKnown RBP16.77■□□□□ 0.28
RNF4-209ENST00000507784 USP53Q70EK8 1073 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 OR4K1Q8NGD4 311 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 WDR20Q8TBZ3 569 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 USP7Q93009 1102 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 MTERF1Q99551 399 aaKnown RBP16.77■□□□□ 0.28
RNF4-209ENST00000507784 CCT7Q99832 543 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 SYNDIG1Q9H7V2 258 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 NT5DC2Q9H857 520 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 GIMAP2Q9UG22 337 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 POMT2Q9UKY4 750 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 PCDHGB2Q9Y5G2 931 aa16.77■□□□□ 0.28
RNF4-209ENST00000507784 HEATR5BQ9P2D3 2071 aa16.77■□□□□ 0.27
RNF4-209ENST00000507784 LY6G6EA0A0G2JKS1 128 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 TRBC2A0A5B9 178 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 E9PBE3 544 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 DLL1O00548 723 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 KLHL41O60662 606 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 SH3BGRLO75368 114 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 SERPIND1P05546 499 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 NCF2P19878 526 aaPredicted RBP16.76■□□□□ 0.27
RNF4-209ENST00000507784 NBL1P41271 181 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 GRK6P43250 576 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 LSSP48449 732 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 CYP4F2P78329 520 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 HMGCS1Q01581 520 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 NAA25Q14CX7 972 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 NR6A1Q15406 480 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 GALNTL6Q49A17 601 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 AASDHQ4L235 1098 aaPredicted RBP16.76■□□□□ 0.27
RNF4-209ENST00000507784 SPDYAQ5MJ70 313 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 PERM1Q5SV97 790 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 ADNP2Q6IQ32 1131 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 ALYREFQ86V81 257 aaKnown RBP16.76■□□□□ 0.27
RNF4-209ENST00000507784 PAQR7Q86WK9 346 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 LAS2Q8IYD9 372 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 OR2T11Q8NH01 316 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 CEP70Q8NHQ1 597 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 HUS1BQ8NHY5 278 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 ACTRT2Q8TDY3 377 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 CNDP2Q96KP4 475 aaKnown RBP16.76■□□□□ 0.27
RNF4-209ENST00000507784 TWSG1Q9GZX9 223 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 EPB41L1Q9H4G0 881 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 AKTIPQ9H8T0 292 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 TMEM9BQ9NQ34 198 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 KLHL3Q9UH77 587 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 U3KQA8 63 aa16.76■□□□□ 0.27
RNF4-209ENST00000507784 EME2A4GXA9 379 aaPredicted RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 MAGEB17A8MXT2 336 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 CDX4O14627 284 aaPredicted RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 FLRT2O43155 660 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 TNFSF14O43557 240 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 LCMT2O60294 686 aaKnown RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 NRP2O60462 931 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 PNLIPP16233 465 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 LBPP18428 481 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 GFERP55789 205 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 RPS13P62277 151 aaKnown RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 GPLD1P80108 840 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 CYP4F3Q08477 520 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 CSTF3Q12996 717 aaKnown RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 CSRP2Q16527 193 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 PROX2Q3B8N5 592 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 ATP6AP1LQ52LC2 224 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 SNAP47Q5SQN1 464 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 FCRL6Q6DN72 434 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 ZNF425Q6IV72 752 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 Q6ZSR9 355 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 TRIM46Q7Z4K8 759 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 SPRED1Q7Z699 444 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■■■■ 69.6
RNF4-209ENST00000507784 IFI44Q8TCB0 444 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 NAT6Q93015 286 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 ZUFSPQ96AP4 578 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 ZDHHC12Q96GR4 267 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 MAELQ96JY0 434 aaKnown RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 MAP3K3Q99759 626 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 CCDC3Q9BQI4 270 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 PITHD1Q9GZP4 211 aaPredicted RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 SEMA6CQ9H3T2 930 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 ANKMY1Q9P2S6 941 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 SLC12A4Q9UP95 1085 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 TRIM33Q9UPN9 1127 aa16.75■□□□□ 0.27
RNF4-209ENST00000507784 ARID1BQ8NFD5 2236 aaPredicted RBP16.75■□□□□ 0.27
RNF4-209ENST00000507784 A0A0J9YVX5 310 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 SLC9B1P1A6NJY1 282 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 KIF1CO43896 1103 aaKnown RBP16.74■□□□□ 0.27
RNF4-209ENST00000507784 SEC22BO75396 215 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 DCTN3O75935 186 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 TGFB1P01137 390 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 CKMT1AP12532 417 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 CD1CP29017 333 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 BCL6P41182 706 aa16.74■□□□□ 0.27
RNF4-209ENST00000507784 SCTRP47872 440 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms