RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CLIP3Q96DZ5 547 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 MACROD1Q9BQ69 325 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 SLC7A5P2Q9GIP4 190 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 CENPHQ9H3R5 247 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 ACTR5Q9H9F9 607 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-205ENST00000503401 OPTCQ9UBM4 332 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 DCDC2Q9UHG0 476 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 EMCNQ9ULC0 261 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 ZMIZ1Q9ULJ6 1067 aa15.77■□□□□ 0.12
SCLT1-205ENST00000503401 SCN3AQ9NY46 2000 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 CCDC88CQ9P219 2028 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 K7EPI3 171 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 COPEO14579 308 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 P2RX6O15547 441 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 KLK10O43240 276 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 CPNE3O75131 537 aaKnown RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 SMIM24O75264 130 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 GLRA3O75311 464 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 GSTA1P08263 222 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 GNAZP19086 355 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 GPS2Q13227 327 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 HKDC1Q2TB90 917 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 C1orf189Q5VU69 101 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 C6orf15Q6UXA7 325 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 SLCO4C1Q6ZQN7 724 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 VASH2Q86V25 355 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 LCA5Q86VQ0 697 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 NLGN4XQ8N0W4 816 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 DTWD1Q8N5C7 304 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 TEX9Q8N6V9 391 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 NLGN4YQ8NFZ3 816 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 OR4K1Q8NGD4 311 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 HNRNPLLQ8WVV9 542 aaKnown RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 NKD1Q969G9 470 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 ZNF285Q96NJ3 590 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 ACSS2Q9NR19 701 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 DHCR7Q9UBM7 475 aaKnown RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 PCDHB3Q9Y5E6 796 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 MGAQ8IWI9 3026 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 A8MT66 165 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 OR1F1O43749 312 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 SRPX2O60687 465 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 CREB1P16220 341 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 EEF1DP29692 281 aaKnown RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 CRHR1P34998 444 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 GRK3P35626 688 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 RPS15AP62244 130 aaKnown RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 SLC18A2Q05940 514 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 TLDC1Q6P9B6 456 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 FAM199XQ6PEV8 388 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 RPS27LQ71UM5 84 aaKnown RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 VN1R4Q7Z5H5 301 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 CACNA2D3Q8IZS8 1091 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 IL22RA1Q8N6P7 574 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 CSNK1A1LQ8N752 337 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 RERGQ96A58 199 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-205ENST00000503401 PELI2Q9HAT8 420 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 PCDHGA4Q9Y5G9 962 aa15.76■□□□□ 0.11
SCLT1-205ENST00000503401 EPG5Q9HCE0 2579 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 CLGNO14967 610 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 RGS16O15492 202 aaPredicted RBP15.75■□□□□ 0.11
SCLT1-205ENST00000503401 SPAG7O75391 227 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 MED26O95402 600 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 C1GALT1C1LP0DN25 315 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 ITPKBP27987 946 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 CCT5P48643 541 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 REEP5Q00765 189 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 RELAQ04206 551 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 PCBP2Q15366 365 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCLT1-205ENST00000503401 XKR6Q5GH73 641 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 TCTE1Q5JU00 501 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 LCN10Q6JVE6 187 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 SPACA3Q8IXA5 215 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 MOCOSQ96EN8 888 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 NSUN5Q96P11 429 aaKnown RBP15.75■□□□□ 0.11
SCLT1-205ENST00000503401 AIF1LQ9BQI0 150 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 GEMIN8Q9NWZ8 242 aaKnown RBP15.75■□□□□ 0.11
SCLT1-205ENST00000503401 GPRC5BQ9NZH0 403 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 RUVBL1Q9Y265 456 aaKnown RBP15.75■□□□□ 0.11
SCLT1-205ENST00000503401 ANGPTL3Q9Y5C1 460 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 AP1M2Q9Y6Q5 423 aa15.75■□□□□ 0.11
SCLT1-205ENST00000503401 TRBC2A0A5B9 178 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 E2F3O00716 465 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 RRP8O43159 456 aaKnown RBP15.74■□□□□ 0.11
SCLT1-205ENST00000503401 DLX3O60479 287 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 PROCP04070 461 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 EPB42P16452 691 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 CD22P20273 847 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 ALAS2P22557 587 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 RORAP35398 523 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 SNRPNP63162 240 aaKnown RBP15.74■□□□□ 0.11
SCLT1-205ENST00000503401 CYP4F2P78329 520 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 CHIT1Q13231 466 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 GTF2H2Q13888 395 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 DOC2AQ14183 400 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 SLBPQ14493 270 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCLT1-205ENST00000503401 CASP8Q14790 479 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 GRM7Q14831 915 aa15.74■□□□□ 0.11
SCLT1-205ENST00000503401 RBBP5Q15291 538 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms