RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SPDL1Q96EA4 605 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 SFXN2Q96NB2 322 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 SEPHS2Q99611 448 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 BARHL1Q9BZE3 327 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 LAT2Q9GZY6 243 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 S1PR5Q9H228 398 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 SERINC1Q9NRX5 453 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 OLAHQ9NV23 265 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 FLRT3Q9NZU0 649 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 IL17BQ9UHF5 180 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 STK36Q9NRP7 1315 aa5.2□□□□□ -1.58
NIPBL-203ENST00000503274 KIAA0100Q14667 2235 aaKnown RBP5.19□□□□□ -1.58
NIPBL-203ENST00000503274 IGHV4-61A0A0C4DH41 118 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 LOC101059948A0A1B0GTJ6 334 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 CIAO1O76071 339 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 TRUB2O95900 331 aaKnown RBP5.19□□□□□ -1.58
NIPBL-203ENST00000503274 IGHV4-59P01825 116 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 GNB3P16520 340 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 IL11P20809 199 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 CA4P22748 312 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 CCR3P51677 355 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 ATP12AP54707 1039 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 SP3Q02447 781 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 SNTB1Q13884 538 aaKnown RBP5.19□□□□□ -1.58
NIPBL-203ENST00000503274 C6orf163Q5TEZ5 329 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 FAM198BQ6UWH4 519 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 ERO1BQ86YB8 467 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 ZNF843Q8N446 348 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 TC2NQ8N9U0 490 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 TEKT4Q8WW24 435 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 ARHGAP45Q92619 1136 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 OPTNQ96CV9 577 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 LRR1Q96L50 414 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 ANKZF1Q9H8Y5 726 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 ZCCHC17Q9NP64 241 aaKnown RBP5.19□□□□□ -1.58
NIPBL-203ENST00000503274 PRMT7Q9NVM4 692 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-203ENST00000503274 INTS10Q9NVR2 710 aaKnown RBP5.19□□□□□ -1.58
NIPBL-203ENST00000503274 C2orf42Q9NWW7 574 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 TAB2Q9NYJ8 693 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 LRWD1Q9UFC0 647 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 TTLL3Q9Y4R7 772 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 TRIM17Q9Y577 477 aa5.19□□□□□ -1.58
NIPBL-203ENST00000503274 ECM29Q5VYK3 1845 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 CEP290O15078 2479 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 HTTP42858 3142 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 CCL15-CCL14A0A0B4J2E2 113 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 NADKO95544 446 aaPredicted RBP5.18□□□□□ -1.58
NIPBL-203ENST00000503274 EML2O95834 649 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 MTHFRP42898 656 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 GPR17Q13304 367 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 ALCAMQ13740 583 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 CCL15Q16663 113 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 C9orf152Q5JTZ5 239 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 ELFN2Q5R3F8 820 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 CEP85LQ5SZL2 805 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 APOBEC3HQ6NTF7 200 aaKnown RBP5.18□□□□□ -1.58
NIPBL-203ENST00000503274 TMEM139Q8IV31 216 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 MAPKAPK5-AS1Q8N8E1 139 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 NPEPL1Q8NDH3 523 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 FAM151AQ8WW52 585 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 ATL1Q8WXF7 558 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 DHX58Q96C10 678 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 GIMAP5Q96F15 307 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 GPR88Q9GZN0 384 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 SDR39U1Q9NRG7 319 aaPredicted RBP5.18□□□□□ -1.58
NIPBL-203ENST00000503274 PADI2Q9Y2J8 665 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 RIPK3Q9Y572 518 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 WDR81Q562E7 1941 aa5.18□□□□□ -1.58
NIPBL-203ENST00000503274 MKI67P46013 3256 aaKnown RBP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 APOHP02749 345 aaPredicted RBP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 HOXD10P28358 340 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 CAPZA2P47755 286 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 PRMT2P55345 433 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 B3GALT5-AS1P59052 145 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 HNRNPKP61978 463 aaKnown RBP eCLIP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 GSTO1P78417 241 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 PPIL2Q13356 520 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 PRPF4BQ13523 1007 aaKnown RBP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 VGLL4Q14135 290 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 P2RY6Q15077 328 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 TMEM266Q2M3C6 531 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 LETM2Q2VYF4 491 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 GTDC1Q4AE62 458 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 PHLDA2Q53GA4 152 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 TMED8Q6PL24 325 aaPredicted RBP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 SLC16A9Q7RTY1 509 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 TMPRSS11BQ86T26 416 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 DZIP1Q86YF9 867 aaKnown RBP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 WDSUB1Q8N9V3 476 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 SSMEM1Q8WWF3 244 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 FNBP1Q96RU3 617 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 NUP85Q9BW27 656 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 NOL11Q9H8H0 719 aaKnown RBP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 PIH1D3Q9NQM4 214 aaKnown RBP5.17□□□□□ -1.58
NIPBL-203ENST00000503274 NKIRAS2Q9NYR9 191 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 SLC24A2Q9UI40 661 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 SALL1Q9NSC2 1324 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 AK9Q5TCS8 1911 aa5.17□□□□□ -1.58
NIPBL-203ENST00000503274 RPAP1Q9BWH6 1393 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms