RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CBX6O95503 412 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 CELA2AP08217 269 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 ACPPP15309 386 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 EZRP15311 586 aaKnown RBP15.44■□□□□ 0.06
SCLT1-204ENST00000503215 EMP2P54851 167 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 ABATP80404 500 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 NAA25Q14CX7 972 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 AGAP7PQ5VUJ5 663 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 IGFL2Q6UWQ7 119 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 LINC00696Q6ZRV3 163 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 PRSS41Q7RTY9 318 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 KLHL7Q8IXQ5 586 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 CATSPER1Q8NEC5 780 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 PRR7Q8TB68 274 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 SLCO2A1Q92959 643 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 RERGQ96A58 199 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-204ENST00000503215 ALKBH8Q96BT7 664 aaKnown RBP15.44■□□□□ 0.06
SCLT1-204ENST00000503215 CFAP36Q96G28 342 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 AGAP4Q96P64 663 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 LHPPQ9H008 270 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 IDSB3KWA1 339 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 TSPAN12O95859 305 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 HPP00738 406 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 COX6A1P12074 109 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 ELK3P41970 407 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 TBPL1P62380 186 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 CSNK1G2P78368 415 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 RELAQ04206 551 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 EEF1A2Q05639 463 aaKnown RBP15.43■□□□□ 0.06
SCLT1-204ENST00000503215 NAE1Q13564 534 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 SPANXN3Q5MJ09 141 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 TEDDM1Q5T9Z0 273 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 CREG2Q8IUH2 290 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 ZC3H7AQ8IWR0 971 aaKnown RBP15.43■□□□□ 0.06
SCLT1-204ENST00000503215 CNTN4Q8IWV2 1026 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 OR9A4Q8NGU2 314 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 PSMF1Q92530 271 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 LINGO1Q96FE5 620 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 CCDC138Q96M89 665 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 WDR77Q9BQA1 342 aaPredicted RBP15.43■□□□□ 0.06
SCLT1-204ENST00000503215 TRIM51Q9BSJ1 452 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 LRRC4CQ9HCJ2 640 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 IKZF3Q9UKT9 509 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 CDC14AQ9UNH5 594 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 NOVA2Q9UNW9 492 aaKnown RBP15.43■□□□□ 0.06
SCLT1-204ENST00000503215 CHMP2BQ9UQN3 213 aa15.43■□□□□ 0.06
SCLT1-204ENST00000503215 COPG1Q9Y678 874 aaKnown RBP15.43■□□□□ 0.06
SCLT1-204ENST00000503215 FEZF1A0PJY2 475 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 OR2W5A6NFC9 320 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 MAP2K7O14733 419 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 FANCGO15287 622 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 TP73O15350 636 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 LCMT2O60294 686 aaKnown RBP15.42■□□□□ 0.06
SCLT1-204ENST00000503215 GARNL3Q5VVW2 1013 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 AGTRAPQ6RW13 159 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 DNAJB14Q8TBM8 379 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 MCOLN3Q8TDD5 553 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 TM9SF4Q92544 642 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 MVB12AQ96EY5 273 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 CERS2Q96G23 380 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 BARD1Q99728 777 aaKnown RBP15.42■□□□□ 0.06
SCLT1-204ENST00000503215 OLFM1Q99784 485 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 DRC3Q9H069 523 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 PARVBQ9HBI1 364 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 CCDC177Q9NQR7 707 aaPredicted RBP15.42■□□□□ 0.06
SCLT1-204ENST00000503215 TMEM184CQ9NVA4 438 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 UTP6Q9NYH9 597 aaKnown RBP15.42■□□□□ 0.06
SCLT1-204ENST00000503215 TAS2R13Q9NYV9 303 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 PLA2G3Q9NZ20 509 aa15.42■□□□□ 0.06
SCLT1-204ENST00000503215 SCN3AQ9NY46 2000 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 EIF3FO00303 357 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-204ENST00000503215 KLHL41O60662 606 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 TTC4O95801 387 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 C8GP07360 202 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 TCP1P17987 556 aaKnown RBP15.41■□□□□ 0.06
SCLT1-204ENST00000503215 BCL6P41182 706 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 MRPS25P82663 173 aaKnown RBP15.41■□□□□ 0.06
SCLT1-204ENST00000503215 UGT3A1Q6NUS8 523 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 ISLR2Q6UXK2 745 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 NDUFAF7Q7L592 441 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 GPATCH11Q8N954 259 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 PPP4R1Q8TF05 950 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 SSC4DQ8WTU2 575 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 PYCR2Q96C36 320 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 CNDP1Q96KN2 507 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 SLC29A3Q9BZD2 475 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 TGIF2Q9GZN2 237 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 MKKSQ9NPJ1 570 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-204ENST00000503215 PPANQ9NQ55 473 aaKnown RBP15.41■□□□□ 0.06
SCLT1-204ENST00000503215 POLEQ07864 2286 aa15.41■□□□□ 0.06
SCLT1-204ENST00000503215 IGHV1-45A0A0A0MS14 117 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 TTI1O43156 1089 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 BMP10O95393 424 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 HEXBP07686 556 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 ANXA5P08758 320 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 PRR35P0CG20 571 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 CDH1P12830 882 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 NPPBP16860 134 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 VARSP26640 1264 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms