RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 LMAN2LQ9H0V9 348 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 Q9H521 79 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 CLMPQ9H6B4 373 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 A0A1B0GVC2 190 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 K7ESM1 405 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 MMP20O60882 483 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 KCNH1O95259 989 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 JUPP14923 745 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ZNF26P17031 533 aaPredicted RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 OPRD1P41143 372 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 BDKRB1P46663 353 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 HSPA13P48723 471 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 SELPLGQ14242 412 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 PDK3Q15120 406 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 CCSMST1Q4G0I0 132 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 TMEM52BQ4KMG9 183 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ZNF658BQ4V348 819 aaPredicted RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 MTX3Q5HYI7 312 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 SPANXN4Q5MJ08 99 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 TBCELQ5QJ74 424 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 TMTC4Q5T4D3 741 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 FRG2Q64ET8 278 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 AGTRAPQ6RW13 159 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 VITQ6UXI7 678 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 AMIGO2Q86SJ2 522 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 GPR149Q86SP6 731 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 THOC6Q86W42 341 aaKnown RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 KLHDC8AQ8IYD2 350 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ADGRG5Q8IZF4 528 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 KRTCAP2Q8N6L1 136 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 TOR1AIP2Q8NFQ8 470 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 NCLNQ969V3 563 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 PPWD1Q96BP3 646 aaKnown RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 CMTM7Q96FZ5 175 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 FRG2BQ96QU4 278 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ZCCHC2Q9C0B9 1178 aaKnown RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 COQ10BQ9H8M1 238 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 LIN28AQ9H9Z2 209 aaKnown RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 DYRK4Q9NR20 520 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 STOX2Q9P2F5 926 aaPredicted RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 USP22Q9UPT9 525 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 AURKCQ9UQB9 309 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 DLGAP4Q9Y2H0 992 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 NEUROG3Q9Y4Z2 214 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 CHD7Q9P2D1 2997 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 COL4A3Q01955 1670 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 TBC1D3BA6NDS4 549 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 OR6C65A6NJZ3 312 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 NPIPB8E9PQR5 432 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 UGDHO60701 494 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ICMTO60725 284 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 IL6P05231 212 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 GPIP06744 558 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 PIM1P11309 404 aaPredicted RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 PRPS2P11908 318 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 HPGDP15428 266 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 NCK1P16333 377 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 IL10P22301 178 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 IL12RB1P42701 662 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 GPR1P46091 355 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 OR4D2P58180 307 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 RPS14P62263 151 aaKnown RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 IRF8Q02556 426 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 AASDHQ4L235 1098 aaPredicted RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 NDUFAF5Q5TEU4 345 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 LIPJQ5W064 366 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 RAET1GQ6H3X3 334 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 OR52E8Q6IFG1 317 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ERN2Q76MJ5 926 aaKnown RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 NUP54Q7Z3B4 507 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 RALGPS2Q86X27 583 aaPredicted RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 MARVELD2Q8N4S9 558 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 CPA6Q8N4T0 437 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ANKFN1Q8N957 763 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 CLHC1Q8NHS4 586 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 SUSD6Q92537 303 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 GTF2H4Q92759 462 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 FOPNLQ96NB1 174 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 FERD3LQ96RJ6 166 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 IGFLR1Q9H665 355 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 SDHAF3Q9NRP4 125 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 TEKT2Q9UIF3 430 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 CAB39Q9Y376 341 aaPredicted RBP11.2□□□□□ -0.62
USP46-204ENST00000503060 AP4B1Q9Y6B7 739 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 KIAA1549LQ6ZVL6 1849 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 LRRK1Q38SD2 2015 aa11.2□□□□□ -0.62
USP46-204ENST00000503060 ZFC3H1O60293 1989 aaKnown RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 KIF26AQ9ULI4 1882 aaPredicted RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 TCRBV5S2A0A599 114 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 H0YJX3 145 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 NPC1O15118 1278 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 HNRNPRO43390 633 aaKnown RBP11.19□□□□□ -0.62
USP46-204ENST00000503060 DFNA5O60443 496 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 LILRB5O75023 590 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 BMP2P12643 396 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 PDHA2P29803 388 aa11.19□□□□□ -0.62
USP46-204ENST00000503060 CLDN8P56748 225 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms