RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 CHEK2O96017 543 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 KRT6AP02538 564 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 KRT6BP04259 564 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 HGFP14210 728 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 EPORP19235 508 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 BGNP21810 368 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 KRT6CP48668 564 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 CDH13P55290 713 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 ABCE1P61221 599 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 TRAF3Q13114 568 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 SLBPQ14493 270 aaKnown RBP eCLIP16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 TUBB8Q3ZCM7 444 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 MANEAQ5SRI9 462 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 CATSPEREQ5SY80 951 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 FCRL6Q6DN72 434 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 MED27Q6P2C8 311 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 TMIGD1Q6UXZ0 262 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 RGS9BPQ6ZS82 235 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 MYLK4Q86YV6 388 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 TRPV3Q8NET8 790 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 MDM1Q8TC05 714 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 AGAP11Q8TF27 550 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 RERGQ96A58 199 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 NSUN5Q96P11 429 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 ENAMQ9NRM1 1142 aa16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 GEMIN8Q9NWZ8 242 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-215ENST00000498160 ANKDD1BA6NHY2 528 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 A8MU76 341 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 B4E171 279 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 CSO75390 466 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 PVRP15151 417 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 HMOX2P30519 316 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 TSPAN7P41732 249 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 LSSP48449 732 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 SLC1A6P48664 564 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 HK2P52789 917 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 RAB15P59190 212 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 IL11RAQ14626 422 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 TTC19Q6DKK2 380 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 TMPRSS9Q7Z410 1059 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 LAS2Q8IYD9 372 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 DNAJC22Q8N4W6 341 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 MFSD9Q8NBP5 474 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 OR4F6Q8NGB9 312 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 CKAP2Q8WWK9 683 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 FAR2Q96K12 515 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 FCRL4Q96PJ5 515 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 CCT7Q99832 543 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 B3GNT4Q9C0J1 378 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 ILKAPQ9H0C8 392 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 MID1IP1Q9NPA3 183 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 ZFP69BQ9UJL9 534 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 PILRAQ9UKJ1 303 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 PPT2Q9UMR5 302 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 PIEZO1Q92508 2521 aa16.84■□□□□ 0.29
CTDSP1-215ENST00000498160 URADA6NGE7 173 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 FGF4P08620 206 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 SLC35G6P0C7Q6 338 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 UROSP10746 265 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 HSD3B1P14060 373 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 MPSTP25325 297 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 HSD3B2P26439 372 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 PIK3CBP42338 1070 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 SCTRP47872 440 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 SEPHS1P49903 392 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 ATP1A2P50993 1020 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 PDX1P52945 283 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 IFT88Q13099 833 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 PWP1Q13610 501 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 ARL13AQ5H913 290 aaPredicted RBP16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 YOD1Q5VVQ6 348 aaPredicted RBP16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 NIPAL1Q6NVV3 410 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 RNF165Q6ZSG1 346 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 ZCCHC23Q6ZST2 131 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 CUZD1Q86UP6 607 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 GPR135Q8IZ08 494 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 CLYBLQ8N0X4 340 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 CAMKVQ8NCB2 501 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 OR52B6Q8NGF0 335 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 WDR36Q8NI36 951 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 ZNF75CPQ92670 426 aaPredicted RBP16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 ZPBPQ9BS86 351 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 RHBGQ9H310 441 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 ELOVL6Q9H5J4 265 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 PSD3Q9NYI0 1048 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 SERTAD3Q9UJW9 196 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 SH2B3Q9UQQ2 575 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 RAP2CQ9Y3L5 183 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 PCDHGA4Q9Y5G9 962 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 AP1M2Q9Y6Q5 423 aa16.83■□□□□ 0.28
CTDSP1-215ENST00000498160 HEATR5BQ9P2D3 2071 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 SLCO1B7G3V0H7 640 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 HAT1O14929 419 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 ZSCAN9O15535 394 aaPredicted RBP16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 OR1F1O43749 312 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 CLEC3AO75596 197 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 EMP3P54852 163 aa16.82■□□□□ 0.28
CTDSP1-215ENST00000498160 RGS1Q08116 209 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms