RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ZNF517Q6ZMY9 492 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 BCDIN3DQ7Z5W3 292 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 KRT77Q7Z794 578 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 C17orf64Q86WR6 236 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 VSIG1Q86XK7 387 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TRMT2AQ8IZ69 625 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 C17orf47Q8NEP4 570 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZFP28Q8NHY6 868 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC30A5Q8TAD4 765 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RXFP4Q8TDU9 374 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PYROXD1Q8WU10 500 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC38A5Q8WUX1 472 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TRIB2Q92519 343 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 HGDQ93099 445 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ORAI3Q9BRQ5 295 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 AIFM2Q9BRQ8 373 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 QTRT1Q9BXR0 403 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 GLIS2Q9BZE0 524 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 NACAP1Q9BZK3 213 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 API5Q9BZZ5 524 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ABCG5Q9H222 651 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CHMP4BQ9H444 224 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 C12orf49Q9H741 205 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 BRF2Q9HAW0 419 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PATZ1Q9HBE1 687 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 PARVGQ9HBI0 331 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CABP5Q9NP86 173 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SIRT7Q9NRC8 400 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SMPD4Q9NXE4 827 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PKD2L2Q9NZM6 624 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ASIC3Q9UHC3 531 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 DPP7Q9UHL4 492 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PTBP2Q9UKA9 531 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ICKQ9UPZ9 632 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 YIPF1Q9Y548 306 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ROCK1Q13464 1354 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IGKV1-9A0A0C4DH69 117 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 HYKKA2RU49 373 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PMS2P1A4D2B8 440 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 C9IYK1 514 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 J3QQQ9 107 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PAGE1O75459 146 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CLDN14O95500 239 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NTSR2O95665 410 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ANXA5P08758 320 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TNFRSF1AP19438 455 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC9A1P19634 815 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 BCL3P20749 454 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PROZP22891 400 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NDUFS1P28331 727 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ADORA2AP29274 412 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EEF1DP29692 281 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CCND3P30281 292 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CDH5P33151 784 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 TCF7P36402 384 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 MSH2P43246 934 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PPP3CCP48454 512 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 DHPSP49366 369 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 DGKQP52824 942 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 BLVRAP53004 296 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MFAP3P55082 362 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 C21orf58P58505 322 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RPL26P61254 145 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 RCN2Q14257 317 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SHBQ15464 509 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF699Q32M78 642 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 BTBD16Q32M84 506 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 GLYR1Q49A26 553 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CCDC93Q567U6 631 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 XKR6Q5GH73 641 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM164Q5U3C3 297 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 VASNQ6EMK4 673 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 OR7E24Q6IFN5 339 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF662Q6ZS27 426 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CIR1Q86X95 450 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 NELFCDQ8IXH7 590 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC15A3Q8IY34 581 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EFCAB13Q8IY85 973 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 KLHDC1Q8N7A1 406 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TC2NQ8N9U0 490 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CYB561A3Q8NBI2 242 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 WDR36Q8NI36 951 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZNF461Q8TAF7 563 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PMM1Q92871 262 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PEX11GQ96HA9 241 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM169Q96HH4 297 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ELMO2Q96JJ3 720 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SPATA17Q96L03 361 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SPACA5Q96QH8 159 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PAFAH2Q99487 392 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CENPOQ9BU64 300 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TRIM8Q9BZR9 551 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM222Q9H0R3 208 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 P2RY12Q9H244 342 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RNF167Q9H6Y7 350 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 UBE2ZQ9H832 354 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 MAN1C1Q9NR34 630 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CYP39A1Q9NYL5 469 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PLK2Q9NYY3 685 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 AMFRQ9UKV5 643 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms