RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 SPTAN1Q13813 2472 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 A0A0A6YYC8 382 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 WIPF3A6NGB9 483 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 I3L1I5 382 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 GFYI3L273 518 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 PGRMC1O00264 195 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 EIF3FO00303 357 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 WFS1O76024 890 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 KLHL18O94889 574 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 LDLRP01130 860 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 F7P08709 466 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 PRR35P0CG20 571 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 COX6A1P12074 109 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 ICAM2P13598 275 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 EDN3P14138 238 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 SKIV2L2P42285 1042 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 AVPR1BP47901 424 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 RGS4P49798 205 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 FAM53BQ14153 422 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 FAAH2Q6GMR7 532 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 ZNF549Q6P9A3 640 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 CYHR1Q6ZMK1 362 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 PALM2Q8IXS6 379 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 PPIL6Q8IXY8 311 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 CPNE9Q8IYJ1 553 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 AMER3Q8N944 861 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 CD200R1Q8TD46 325 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 MCOLN3Q8TDD5 553 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 FAR1Q8WVX9 515 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 TGIF2Q9GZN2 237 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 PCBD2Q9H0N5 130 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 CCDC177Q9NQR7 707 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 TMEM184CQ9NVA4 438 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 RIC8BQ9NVN3 520 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 PTGFRNQ9P2B2 879 aa11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 TRMT6Q9UJA5 497 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-211ENST00000497978 HIVEP3Q5T1R4 2406 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 IGHV1-45A0A0A0MS14 117 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 H7BY64 318 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 FFAR3O14843 346 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 HAT1O14929 419 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 GPR42O15529 346 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 HAUS5O94927 633 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 BMP10O95393 424 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 SERPINA7P05543 415 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MYBL2P10244 700 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 IMPA1P29218 277 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MAGEA3P43357 314 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 FNTAP49354 379 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 PER3P56645 1201 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 RPS15AP62244 130 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MPP1Q00013 466 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 EEF1A2Q05639 463 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 PPP1R7Q15435 360 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 HSP90AA5PQ58FG0 334 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 RPUSD3Q6P087 351 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 RIPOR1Q6ZS17 1223 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 PIWIL4Q7Z3Z4 852 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 LRRC56Q8IYG6 542 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 BCORP1Q8N888 145 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 NAT8LQ8N9F0 302 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 OR1N1Q8NGS0 311 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 BRIX1Q8TDN6 353 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 METTL21AQ8WXB1 218 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 THAP11Q96EK4 314 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 SIGLEC10Q96LC7 697 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MAGEB10Q96LZ2 347 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 CCDC138Q96M89 665 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 PRAP1Q96NZ9 151 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MESP1Q9BRJ9 268 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 AARSD1Q9BTE6 412 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 IARS2Q9NSE4 1012 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 TAS2R13Q9NYV9 303 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MKL2Q9ULH7 1088 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MED16Q9Y2X0 877 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 MRPS2Q9Y399 296 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 NEU2Q9Y3R4 380 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 CNTRLQ7Z7A1 2325 aa11.16□□□□□ -0.62
NUDCD3-211ENST00000497978 SPENQ96T58 3664 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 LOC102723996A0A087X1L8 192 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 TRAV17A0A0B4J275 112 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 A0A1W2PQ72 361 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 PABPN1LA6NDY0 278 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 H0YIG0 161 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 P2RX6O15547 441 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 FOXS1O43638 330 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 TTC4O95801 387 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 C8GP07360 202 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 PGAM1P18669 254 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 CCND1P24385 295 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 TBPL1P62380 186 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 MFSD4BQ5TF39 518 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 PCGF5Q86SE9 256 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 PLD3Q8IV08 490 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 MYO1HQ8N1T3 1032 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 ARHGEF39Q8N4T4 335 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
NUDCD3-211ENST00000497978 ACTRT1Q8TDG2 376 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms