RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 TSFMP43897 325 aaKnown RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 TBPL1P62380 186 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 MFAP5Q13361 173 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 PTK6Q13882 451 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 CRYMQ14894 314 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 TLR1Q15399 786 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 SYT16Q17RD7 645 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 RNASEH2BQ5TBB1 312 aaKnown RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 ATG9BQ674R7 924 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 CYHR1Q6ZMK1 362 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 NDUFAF7Q7L592 441 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 LRRC56Q8IYG6 542 aaPredicted RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 SLC35F6Q8N357 371 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 BRIX1Q8TDN6 353 aaKnown RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 PRAP1Q96NZ9 151 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 OSBPL9Q96SU4 736 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 BARD1Q99728 777 aaKnown RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 EBNA1BP2Q99848 306 aaKnown RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 MKKSQ9NPJ1 570 aaPredicted RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 CCDC177Q9NQR7 707 aaPredicted RBP12.3□□□□□ -0.44
FN1-226ENST00000496542 PTGFRNQ9P2B2 879 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 ASIC3Q9UHC3 531 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 SLC5A6Q9Y289 635 aa12.3□□□□□ -0.44
FN1-226ENST00000496542 EIF3FO00303 357 aaPredicted RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 FOXS1O43638 330 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 BANF1O75531 89 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 LDLRP01130 860 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 CELA2AP08217 269 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 PRR35P0CG20 571 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 SLC26A3P40879 764 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 RGS4P49798 205 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 ARG2P78540 354 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 MAT1AQ00266 395 aaKnown RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 NDUFA9Q16795 377 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 B3GNTL1Q67FW5 361 aaPredicted RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 MBOAT1Q6ZNC8 495 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 ZC3H7AQ8IWR0 971 aaKnown RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 ARHGEF39Q8N4T4 335 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 SIRT6Q8N6T7 355 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 C2CD4AQ8NCU7 369 aaPredicted RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 ST6GALNAC3Q8NDV1 305 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 CATSPER1Q8NEC5 780 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 ACTRT1Q8TDG2 376 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 GRHL3Q8TE85 626 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 EEF1AKMT1Q8WVE0 214 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 ALKBH8Q96BT7 664 aaKnown RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 MAGEB10Q96LZ2 347 aaPredicted RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 C5orf34Q96MH7 638 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 LMF1Q96S06 567 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 RIC8BQ9NVN3 520 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 ADAMTS6Q9UKP5 1117 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 SH2B3Q9UQQ2 575 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 MRPS2Q9Y399 296 aaKnown RBP12.29□□□□□ -0.44
FN1-226ENST00000496542 CRYBG3Q68DQ2 2970 aa12.29□□□□□ -0.44
FN1-226ENST00000496542 CPAMD8Q8IZJ3 1885 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 IGHV1-45A0A0A0MS14 117 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 E2F3O00716 465 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 SERPINA7P05543 415 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 AVPR1BP47901 424 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 RPS15AP62244 130 aaKnown RBP12.28□□□□□ -0.44
FN1-226ENST00000496542 SNRPNP63162 240 aaKnown RBP12.28□□□□□ -0.44
FN1-226ENST00000496542 RELAQ04206 551 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 DHX9Q08211 1270 aaKnown RBP12.28□□□□□ -0.44
FN1-226ENST00000496542 RBM20Q5T481 1227 aaKnown RBP12.28□□□□□ -0.44
FN1-226ENST00000496542 MFSD4BQ5TF39 518 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 LRRC8EQ6NSJ5 796 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 UGT3A1Q6NUS8 523 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 VN1R4Q7Z5H5 301 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 PALM2Q8IXS6 379 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 MYO1HQ8N1T3 1032 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 OR1N1Q8NGS0 311 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 OR9A4Q8NGU2 314 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 GABPB2Q8TAK5 448 aaPredicted RBP12.28□□□□□ -0.44
FN1-226ENST00000496542 ZCCHC10Q8TBK6 192 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 MCOLN3Q8TDD5 553 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 LINGO1Q96FE5 620 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 CCDC138Q96M89 665 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 MACROD1Q9BQ69 325 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 TGIF2Q9GZN2 237 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 DDX47Q9H0S4 455 aaKnown RBP12.28□□□□□ -0.44
FN1-226ENST00000496542 ATG10Q9H0Y0 220 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 TMEM184CQ9NVA4 438 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 TAS2R13Q9NYV9 303 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 PLA2G3Q9NZ20 509 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 SLC17A6Q9P2U8 582 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 MKL2Q9ULH7 1088 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 SNX12Q9UMY4 172 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 PDE10AQ9Y233 779 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 MYO7BQ6PIF6 2116 aa12.28□□□□□ -0.44
FN1-226ENST00000496542 A0A1W2PQ72 361 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 DYTNA2CJ06 578 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 DNALI1O14645 258 aaPredicted RBP12.27□□□□□ -0.45
FN1-226ENST00000496542 JRKO75564 520 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 WFS1O76024 890 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 F10P00742 488 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 C8GP07360 202 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 C8orf89P0DMQ9 161 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 IL1RNP18510 177 aa12.27□□□□□ -0.45
FN1-226ENST00000496542 FDXRP22570 491 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms