RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TOP3AQ13472 1001 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 IL18R1Q13478 541 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 VEZF1Q14119 521 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 NEDD8Q15843 81 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 FNDC3BQ53EP0 1204 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ZC3H12BQ5HYM0 836 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 PAGE2BQ5JRK9 111 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 PSRC1Q6PGN9 363 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 SHQ1Q6PI26 577 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 TMEM26Q6ZUK4 368 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF765Q7L2R6 523 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF551Q7Z340 670 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 CAMKMTQ7Z624 323 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 C12orf40Q86WS4 652 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 HS3ST5Q8IZT8 346 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF480Q8WV37 535 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 CHTF18Q8WVB6 975 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 NEIL2Q969S2 332 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 CXorf40BQ96DE9 158 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 MBOAT4Q96T53 435 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 EFCAB11Q9BUY7 163 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 TPT1P8Q9HAU6 139 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 TM9SF3Q9HD45 589 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ITM2CQ9NQX7 267 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 EBF1Q9UH73 591 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 PCDHGA8Q9Y5G5 932 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 U3KQV3 271 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 NUP210Q8TEM1 1887 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 MKI67P46013 3256 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 EDDM13A0A1B0GTR0 161 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ABCB7O75027 752 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ETHE1O95571 254 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 NFATC1O95644 943 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 LAMP1P11279 417 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 CRHBPP24387 322 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 TIA1P31483 386 aaKnown RBP eCLIP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 KDELR2P33947 212 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 GABARAPL2P60520 117 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ELAVL3Q14576 367 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 SKIV2LQ15477 1246 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 HIST2H2ACQ16777 129 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 HKDC1Q2TB90 917 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 HNRNPA1L2Q32P51 320 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 TCEAL5Q5H9L2 206 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 HIST2H2AA3Q6FI13 130 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 OR2T5Q6IEZ7 315 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 SLCO4C1Q6ZQN7 724 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ZZZ3Q8IYH5 903 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 CLECL1Q8IZS7 167 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 VN1R2Q8NFZ6 395 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 OR2T29Q8NH02 315 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 BADQ92934 168 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 SH3KBP1Q96B97 665 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ARMC5Q96C12 935 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 AMBRA1Q9C0C7 1298 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 OR2AG1Q9H205 316 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 LIN28AQ9H9Z2 209 aaKnown RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 DYRK4Q9NR20 520 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF282Q9UDV7 671 aaPredicted RBP10.69□□□□□ -0.7
CMSS1-208ENST00000496116 CDC14AQ9UNH5 594 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 COQ6Q9Y2Z9 468 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 AP1M2Q9Y6Q5 423 aa10.69□□□□□ -0.7
CMSS1-208ENST00000496116 C17orf113A0A1B0GUU1 675 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 GABRR3A8MPY1 467 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 FOXE1O00358 373 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 PCDH7O60245 1069 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 LZTS3O60299 673 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 FKBP9O95302 570 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 SOD1P00441 154 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 JUNBP17275 347 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 PIGAP37287 484 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 RPS6KA3P51812 740 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 RPS13P62277 151 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 RAE1P78406 368 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 DPTQ07507 201 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 PPP1R8Q12972 351 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 TSTA3Q13630 321 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 STARD3Q14849 445 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 EIF4HQ15056 248 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF658BQ4V348 819 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 TMEM240Q5SV17 173 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 C6orf141Q5SZD1 244 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 GPR107Q5VW38 600 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 FBXO46Q6PJ61 603 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 CBLL1Q75N03 491 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 EIF3MQ7L2H7 374 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 CHST15Q7LFX5 561 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 GPR155Q7Z3F1 870 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 TRMT11Q7Z4G4 463 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 R3HCC1LQ7Z5L2 792 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 TMEM179BQ7Z7N9 219 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 HORMAD1Q86X24 394 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 DCP2Q8IU60 420 aaKnown RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 GPR156Q8NFN8 814 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 OR9A1PQ8NGU1 263 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 PHOSPHO2Q8TCD6 241 aa10.68□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF707Q96C28 371 aaPredicted RBP10.68□□□□□ -0.7
CMSS1-208ENST00000496116 MAGED4Q96JG8 741 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms