RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 EFHD1Q9BUP0 239 aa9.39□□□□□ -0.91
CALD1-223ENST00000496024 CUTCQ9NTM9 273 aa9.39□□□□□ -0.91
CALD1-223ENST00000496024 ZNF358Q9NW07 568 aa9.39□□□□□ -0.91
CALD1-223ENST00000496024 IFT80Q9P2H3 777 aaPredicted RBP9.39□□□□□ -0.91
CALD1-223ENST00000496024 ZNF180Q9UJW8 692 aa9.39□□□□□ -0.91
CALD1-223ENST00000496024 SRPK3Q9UPE1 567 aa9.39□□□□□ -0.91
CALD1-223ENST00000496024 FARSAQ9Y285 508 aaKnown RBP9.39□□□□□ -0.91
CALD1-223ENST00000496024 KCNE2Q9Y6J6 123 aa9.39□□□□□ -0.91
CALD1-223ENST00000496024 LOC400499M0QZD8 3231 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 SCN2AQ99250 2005 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 ATRXP46100 2492 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 C9J4A7 227 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 TERTO14746 1132 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 DSCR3O14972 297 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 P2RX6O15547 441 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 OR1F1O43749 312 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 LCMT2O60294 686 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 CCNT2O60583 730 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 KERAO60938 352 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 MED26O95402 600 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 SERPIND1P05546 499 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 HRH2P25021 359 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 CNTFP26441 200 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 PTPN4P29074 926 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 SLC26A3P40879 764 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 BCL6P41182 706 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 SLCO1A2P46721 670 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 OR1D4P47884 311 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 SLC6A12P48065 614 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 AGTR2P50052 363 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 CSRP3P50461 194 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 ARSFP54793 590 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 FOXL2P58012 376 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 RPS15AP62244 130 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 DCDP81605 110 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 NAA30Q147X3 362 aaPredicted RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 FAM214AQ32MH5 1076 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 NKAIN1Q4KMZ8 207 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 SULT1C3Q6IMI6 304 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 KLC3Q6P597 504 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 ADGRD1Q6QNK2 874 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 FAM198BQ6UWH4 519 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 CCDC91Q7Z6B0 441 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 TCAIMQ8N3R3 496 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 ENDOVQ8N8Q3 282 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 ZNF740Q8NDX6 193 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 SLC45A3Q96JT2 553 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 ZNF285Q96NJ3 590 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 GBP5Q96PP8 586 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 OR2A5Q96R48 311 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 ATOH8Q96SQ7 321 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 TMEM79Q9BSE2 394 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 DHRS4Q9BTZ2 278 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 ACTL8Q9H568 366 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 CNOT10Q9H9A5 744 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 PRM3Q9NNZ6 103 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 DNAJC11Q9NVH1 559 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 NUDT4Q9NZJ9 180 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 CPSF2Q9P2I0 782 aaKnown RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 GPN3Q9UHW5 284 aaPredicted RBP9.38□□□□□ -0.91
CALD1-223ENST00000496024 KCND3Q9UK17 655 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 MAU2Q9Y6X3 613 aa9.38□□□□□ -0.91
CALD1-223ENST00000496024 IQANK1A0A1B0GTG1 560 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 A0A1B0GX78 115 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 CDC14CA4D256 554 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 FITM1A5D6W6 292 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 LRRC14BA6NHZ5 514 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 FOXO6A8MYZ6 492 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 C21orf140B9A014 251 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 GOLGA8RI6L899 631 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 CLGNO14967 610 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 CREG1O75629 220 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 STK16O75716 305 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 CAPN1P07384 714 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 GFAPP14136 432 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 ITGAXP20702 1163 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 HSD17B3P37058 310 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 MAGEA12P43365 314 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 CDC20Q12834 499 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 CDC16Q13042 620 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 ACAP2Q15057 778 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 RBBP5Q15291 538 aaKnown RBP9.37□□□□□ -0.91
CALD1-223ENST00000496024 MUM1Q2TAK8 710 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 PRTGQ2VWP7 1150 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 DEFB109BQ30KR1 87 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
CALD1-223ENST00000496024 NXPE4Q6UWF7 544 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 VN1R4Q7Z5H5 301 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 ABHD11Q8NFV4 315 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 OR2W6PQ8NHA6 318 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 ZCCHC10Q8TBK6 192 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 PROKR1Q8TCW9 393 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.37□□□□□ -0.91
CALD1-223ENST00000496024 EXTL1Q92935 676 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 C10orf90Q96M02 699 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 GPR78Q96P69 363 aa9.37□□□□□ -0.91
CALD1-223ENST00000496024 DPH2Q9BQC3 489 aaPredicted RBP9.37□□□□□ -0.91
CALD1-223ENST00000496024 YIPF2Q9BWQ6 316 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms