RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PTERQ96BW5 349 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 RHBDF1Q96CC6 855 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 THAP11Q96EK4 314 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 TSNARE1Q96NA8 513 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 OR4K3Q96R72 315 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 ALG9Q9H6U8 611 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 CNOT10Q9H9A5 744 aaKnown RBP15.21■□□□□ 0.03
LIME1-209ENST00000494776 ENAMQ9NRM1 1142 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 RUVBL1Q9Y265 456 aaKnown RBP15.21■□□□□ 0.03
LIME1-209ENST00000494776 PTRH2Q9Y3E5 179 aaKnown RBP15.21■□□□□ 0.03
LIME1-209ENST00000494776 KCNE2Q9Y6J6 123 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 MAU2Q9Y6X3 613 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 A0A096LPK6 155 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 STATHP02808 62 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 C2P06681 752 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 FURINP09958 794 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 SLC26A3P40879 764 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 FOLR3P41439 243 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 GCGRP47871 477 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 OR1D4P47884 311 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 MEF2AQ02078 507 aaPredicted RBP15.2■□□□□ 0.02
LIME1-209ENST00000494776 LY6DQ14210 128 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 NDUFA9Q16795 377 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 PRTGQ2VWP7 1150 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 C18orf21Q32NC0 220 aaPredicted RBP15.2■□□□□ 0.02
LIME1-209ENST00000494776 LINC00303Q3SY05 128 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 FAM69BQ5VUD6 431 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 SULT1C3Q6IMI6 304 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 PRMT9Q6P2P2 845 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 KLC3Q6P597 504 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
LIME1-209ENST00000494776 KCTD4Q8WVF5 259 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 APOBEC4Q8WW27 367 aaKnown RBP15.2■□□□□ 0.02
LIME1-209ENST00000494776 NEIL2Q969S2 332 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 NXNL1Q96CM4 212 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 BBC3Q96PG8 261 aaPredicted RBP15.2■□□□□ 0.02
LIME1-209ENST00000494776 VPS11Q9H270 941 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 ZNF304Q9HCX3 659 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 CDC14AQ9UNH5 594 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 MAN2B2Q9Y2E5 1009 aa15.2■□□□□ 0.02
LIME1-209ENST00000494776 KCNE1BA0A087WTH5 132 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 HMX2A2RU54 273 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 ESPNB1AK53 854 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 SUPT3HB4E1H0 165 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 TK2O00142 265 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 RIPK2O43353 540 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 OR1F1O43749 312 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 H2AFYO75367 372 aaKnown RBP15.19■□□□□ 0.02
LIME1-209ENST00000494776 SUPT3HO75486 399 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 ABHD2P08910 425 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 FAM87AP0C7U9 286 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 CNTFP26441 200 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 BCL6P41182 706 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 GDF5P43026 501 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 EMP3P54852 163 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 IRF9Q00978 393 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 DLG1Q12959 904 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 IL10RAQ13651 578 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 CDKL4Q5MAI5 379 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 CATSPEREQ5SY80 951 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 LGSNQ5TDP6 509 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 GARNL3Q5VVW2 1013 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 OVCH1Q7RTY7 1134 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 TMPRSS11BQ86T26 416 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 ASPGQ86U10 573 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
LIME1-209ENST00000494776 CAMKVQ8NCB2 501 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 ABHD11Q8NFV4 315 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.19■□□□□ 0.02
LIME1-209ENST00000494776 THAP4Q8WY91 577 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 C10orf90Q96M02 699 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 YIPF2Q9BWQ6 316 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 IGSF5Q9NSI5 407 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 ZNF180Q9UJW8 692 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 ANKRD12Q6UB98 2062 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 IGSF10Q6WRI0 2623 aa15.19■□□□□ 0.02
LIME1-209ENST00000494776 FASNP49327 2511 aaKnown RBP15.18■□□□□ 0.02
LIME1-209ENST00000494776 TRBC2A0A5B9 178 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 SYCE1LA8MT33 242 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 P2RX6O15547 441 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 PRPF4O43172 522 aaKnown RBP eCLIP15.18■□□□□ 0.026e-10■■□□□ 14
LIME1-209ENST00000494776 LCMT2O60294 686 aaKnown RBP15.18■□□□□ 0.02
LIME1-209ENST00000494776 KERAO60938 352 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 IPO13O94829 963 aaKnown RBP15.18■□□□□ 0.02
LIME1-209ENST00000494776 MED26O95402 600 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 ALBP02768 609 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 ALDOAP04075 364 aaKnown RBP15.18■□□□□ 0.02
LIME1-209ENST00000494776 SERPIND1P05546 499 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 SLC35G6P0C7Q6 338 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 FBLP22087 321 aaKnown RBP15.18■□□□□ 0.02
LIME1-209ENST00000494776 OTX2P32243 289 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 GLRBP48167 497 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 HSPA7P48741 367 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 POLE2P56282 527 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 OCA2Q04671 838 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 MRPL14Q6P1L8 145 aaKnown RBP15.18■□□□□ 0.02
LIME1-209ENST00000494776 PCSK4Q6UW60 755 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 NXPE4Q6UWF7 544 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 ISCA2Q86U28 154 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 RAB43Q86YS6 212 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms