RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MYO7BQ6PIF6 2116 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 CREBBPQ92793 2442 aa11.06□□□□□ -0.64
VTI1A-208ENST00000494728 A0A1W2PQ72 361 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 MAGEB16A2A368 324 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 OR2W5A6NFC9 320 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 H7BY64 318 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 DNALI1O14645 258 aaPredicted RBP11.05□□□□□ -0.64
VTI1A-208ENST00000494728 MAP2K7O14733 419 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 VPS26AO75436 327 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 IPO13O94829 963 aaKnown RBP11.05□□□□□ -0.64
VTI1A-208ENST00000494728 TSPAN12O95859 305 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 HPP00738 406 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 F10P00742 488 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 LDLRP01130 860 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 ENO3P13929 434 aaPredicted RBP11.05□□□□□ -0.64
VTI1A-208ENST00000494728 PGAM1P18669 254 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 IVDP26440 423 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 COL8A1P27658 744 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 SOX11P35716 441 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 GLRBP48167 497 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 EMP3P54852 163 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 OCA2Q04671 838 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 AGAP7PQ5VUJ5 663 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 TRMT10BQ6PF06 316 aaKnown RBP11.05□□□□□ -0.64
VTI1A-208ENST00000494728 PAQR3Q6TCH7 311 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 OTOGQ6ZRI0 2925 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 CATSPER1Q8NEC5 780 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 BRIX1Q8TDN6 353 aaKnown RBP11.05□□□□□ -0.64
VTI1A-208ENST00000494728 EEF1AKMT1Q8WVE0 214 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 MMABQ96EY8 250 aaPredicted RBP11.05□□□□□ -0.64
VTI1A-208ENST00000494728 CCDC138Q96M89 665 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 PRAP1Q96NZ9 151 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 AGAP4Q96P64 663 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 DRC3Q9H069 523 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 KLHL42Q9P2K6 505 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 IKZF3Q9UKT9 509 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 SNX12Q9UMY4 172 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 PDE10AQ9Y233 779 aa11.05□□□□□ -0.64
VTI1A-208ENST00000494728 COPG1Q9Y678 874 aaKnown RBP11.05□□□□□ -0.64
VTI1A-208ENST00000494728 CELSR1Q9NYQ6 3014 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 TEP1Q99973 2627 aaKnown RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 IGHV1-45A0A0A0MS14 117 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 CTAGE15A4D2H0 777 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 ANKUB1A6NFN9 424 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 WIPF3A6NGB9 483 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 FANCGO15287 622 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 PRR35P0CG20 571 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 BCL6P41182 706 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 CARSP49589 748 aaKnown RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 CSNK1G2P78368 415 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 SRSF11Q05519 484 aaKnown RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 MFAP5Q13361 173 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 PTK6Q13882 451 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 ZNF169Q14929 603 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 NAA25Q14CX7 972 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 PCOLCEQ15113 449 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 PPP1R7Q15435 360 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 HP1BP3Q5SSJ5 553 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 THEMIS2Q5TEJ8 643 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 B3GNTL1Q67FW5 361 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 LANCL3Q6ZV70 420 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 CTAGE6Q86UF2 777 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 PDSS2Q86YH6 399 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 CNTN4Q8IWV2 1026 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 SIRT6Q8N6T7 355 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 OR9A4Q8NGU2 314 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 DNAJB14Q8TBM8 379 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 GRHL3Q8TE85 626 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 TM9SF4Q92544 642 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 MVB12AQ96EY5 273 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 FAM167BQ9BTA0 163 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 YIPF2Q9BWQ6 316 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 ATG10Q9H0Y0 220 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 CCDC68Q9H2F9 335 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 CCDC177Q9NQR7 707 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 TRMT1Q9NXH9 659 aaKnown RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 PLA2G3Q9NZ20 509 aa11.04□□□□□ -0.64
VTI1A-208ENST00000494728 TRMT6Q9UJA5 497 aaKnown RBP11.04□□□□□ -0.64
VTI1A-208ENST00000494728 AKAP9Q99996 3911 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 POLQO75417 2590 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 LOC102723996A0A087X1L8 192 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 IGHV3-20A0A0C4DH32 117 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 FEZF1A0PJY2 475 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 TP73O15350 636 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 ZBTB14O43829 449 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 NRDCO43847 1150 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 CCNDBP1O95273 360 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 AHSGP02765 367 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 ITGAMP11215 1152 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 IL1RNP18510 177 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 HSD17B2P37059 387 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 TSFMP43897 325 aaKnown RBP11.03□□□□□ -0.64
VTI1A-208ENST00000494728 EMP2P54851 167 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 ABATP80404 500 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 RELAQ04206 551 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 GARNL3Q5VVW2 1013 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 AGTRAPQ6RW13 159 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 TMEM205Q6UW68 189 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 ISLR2Q6UXK2 745 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 NDUFAF7Q7L592 441 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms