RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LOC101059948A0A1B0GTJ6 334 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 CCDC151A5D8V7 595 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 SRRM3A6NNA2 597 aaPredicted RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 RRP8O43159 456 aaKnown RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 CPNE3O75131 537 aaKnown RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 DLGAP3O95886 979 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 TUBBP07437 444 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 RBP1P09455 135 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 EZRP15311 586 aaKnown RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 EPORP19235 508 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 HNF4AP41235 474 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 CCR8P51685 355 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 NFKB2Q00653 900 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 PDK4Q16654 411 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 XKR6Q5GH73 641 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 C6orf15Q6UXA7 325 aaPredicted RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 DTX1Q86Y01 620 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 TMEM151BQ8IW70 566 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 SHISA5Q8N114 240 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 CSNK1A1LQ8N752 337 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 CCDC63Q8NA47 563 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 KDF1Q8NAX2 398 aaPredicted RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 MR1Q95460 341 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 RERGQ96A58 199 aaPredicted RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 CDK15Q96Q40 435 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 MRPL57Q9BQC6 102 aaKnown RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 ZPBPQ9BS86 351 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 SPRY4Q9C004 299 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 CPNE5Q9HCH3 593 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 TMEM184CQ9NVA4 438 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 OPTCQ9UBM4 332 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 EMCNQ9ULC0 261 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 RUVBL1Q9Y265 456 aaKnown RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 MRPS2Q9Y399 296 aaKnown RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 ANGPTL3Q9Y5C1 460 aa10.63□□□□□ -0.71
APTX-230ENST00000494649 MDC1Q14676 2089 aaKnown RBP10.63□□□□□ -0.71
APTX-230ENST00000494649 SH3BGRLO75368 114 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 KATNA1O75449 491 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 B3GALT4O96024 378 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 COL6A2P12110 1019 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 GNAZP19086 355 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 WT1P19544 449 aaPredicted RBP10.62□□□□□ -0.71
APTX-230ENST00000494649 F8A1P23610 371 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 RPS18P62269 152 aaKnown RBP10.62□□□□□ -0.71
APTX-230ENST00000494649 SLBPQ14493 270 aaKnown RBP eCLIP10.62□□□□□ -0.71
APTX-230ENST00000494649 SETDB1Q15047 1291 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 CYB5D1Q6P9G0 228 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 NXPE4Q6UWF7 544 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 SH2D5Q6ZV89 423 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 VN1R4Q7Z5H5 301 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 TCAIMQ8N3R3 496 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 KCT2Q8NC54 265 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 ZCCHC10Q8TBK6 192 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 NDC1Q9BTX1 674 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 CHST8Q9H2A9 424 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 LHX9Q9NQ69 397 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 IL17BQ9UHF5 180 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 CROTQ9UKG9 612 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 TMEM184BQ9Y519 407 aaPredicted RBP10.62□□□□□ -0.71
APTX-230ENST00000494649 MGAQ8IWI9 3026 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 USP24Q9UPU5 2620 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 HYKKA2RU49 373 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 A8MT66 165 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 MEN1O00255 615 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 COPEO14579 308 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 NDUFS4O43181 175 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 SMIM24O75264 130 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 FKBP9O95302 570 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 LIFP15018 202 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 TCN2P20062 427 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 CD22P20273 847 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 GRK3P35626 688 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 GGT5P36269 586 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 DLSTP36957 453 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 OR1D4P47884 311 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 PIK3CGP48736 1102 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 ALDH18A1P54886 795 aaKnown RBP10.62□□□□□ -0.71
APTX-230ENST00000494649 CDH13P55290 713 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 TLE3Q04726 772 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 CHIT1Q13231 466 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 LRRC69Q6ZNQ3 347 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 SLCO4C1Q6ZQN7 724 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 PRSS41Q7RTY9 318 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 TRABD2AQ86V40 505 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 RNF175Q8N4F7 328 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 ANKRD53Q8N9V6 530 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 ABHD11Q8NFV4 315 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 CCT6BQ92526 530 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 PPCSQ9HAB8 311 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 SEMA4BQ9NPR2 832 aaPredicted RBP10.62□□□□□ -0.71
APTX-230ENST00000494649 CUTCQ9NTM9 273 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 TXLNGQ9NUQ3 528 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 GEMIN8Q9NWZ8 242 aaKnown RBP10.62□□□□□ -0.71
APTX-230ENST00000494649 KLK4Q9Y5K2 254 aa10.62□□□□□ -0.71
APTX-230ENST00000494649 TMEM8BA6NDV4 472 aa10.61□□□□□ -0.71
APTX-230ENST00000494649 K7EPI3 171 aa10.61□□□□□ -0.71
APTX-230ENST00000494649 E2F3O00716 465 aa10.61□□□□□ -0.71
APTX-230ENST00000494649 PPP6CO00743 305 aa10.61□□□□□ -0.71
APTX-230ENST00000494649 RGS16O15492 202 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms