RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 FBXO6Q9NRD1 293 aaPredicted RBP11.99□□□□□ -0.49
SKA1-205ENST00000494518 C14orf105Q9NVL8 296 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 RIC8BQ9NVN3 520 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 MKL2Q9ULH7 1088 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 SOX13Q9UN79 622 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 ENTPD4Q9Y227 616 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 AKAP9Q99996 3911 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 PDZD2O15018 2839 aa11.99□□□□□ -0.49
SKA1-205ENST00000494518 NCOA6Q14686 2063 aaPredicted RBP11.98□□□□□ -0.49
SKA1-205ENST00000494518 A8MUI8 341 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 H3BMM5 538 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.49
SKA1-205ENST00000494518 WISP2O76076 250 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 FGGP02679 453 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 ESR1P03372 595 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 ATP5DP30049 168 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 PRDX1Q06830 199 aaKnown RBP11.98□□□□□ -0.49
SKA1-205ENST00000494518 NAA25Q14CX7 972 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 CCNG2Q16589 344 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 MINDY4Q4G0A6 757 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 RNF187Q5TA31 235 aaPredicted RBP11.98□□□□□ -0.49
SKA1-205ENST00000494518 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 ANKRD22Q5VYY1 191 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 ZNF470Q6ECI4 717 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 PRSS41Q7RTY9 318 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 GAS2L3Q86XJ1 694 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 REXO1L1PQ8IX06 675 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 MCEMP1Q8IX19 187 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 SLC34A3Q8N130 599 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 OR9A4Q8NGU2 314 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 ZNF480Q8WV37 535 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 HAS2Q92819 552 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 ZNF669Q96BR6 464 aaPredicted RBP11.98□□□□□ -0.49
SKA1-205ENST00000494518 ZNF700Q9H0M5 742 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 FAM114A2Q9NRY5 505 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 HCN3Q9P1Z3 774 aa11.98□□□□□ -0.49
SKA1-205ENST00000494518 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
SKA1-205ENST00000494518 ANKRD17O75179 2603 aaKnown RBP11.97□□□□□ -0.49
SKA1-205ENST00000494518 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 CELSR1Q9NYQ6 3014 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 CTAGE9A4FU28 777 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 H7BY64 318 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 PFDN6O15212 129 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 CCNDBP1O95273 360 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 RASAL1O95294 804 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 C8orf89P0DMQ9 161 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 EZRP15311 586 aaKnown RBP11.97□□□□□ -0.49
SKA1-205ENST00000494518 TPSB2P20231 275 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 OGNP20774 298 aaKnown RBP11.97□□□□□ -0.49
SKA1-205ENST00000494518 FDXRP22570 491 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 CLCN7P51798 805 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 CTBP1Q13363 440 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 TPSAB1Q15661 275 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 ABHD17BQ5VST6 288 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 KIAA0930Q6ICG6 404 aaPredicted RBP11.97□□□□□ -0.49
SKA1-205ENST00000494518 NEPROQ6NW34 567 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 TMEM207Q6UWW9 146 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 CILP2Q8IUL8 1156 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 DENND6AQ8IWF6 608 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 ARHGEF39Q8N4T4 335 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 ZCCHC10Q8TBK6 192 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 ITLN2Q8WWU7 325 aaPredicted RBP11.97□□□□□ -0.49
SKA1-205ENST00000494518 MVB12AQ96EY5 273 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 CCDC120Q96HB5 630 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 PRAP1Q96NZ9 151 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 RBCK1Q9BYM8 510 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 TSGA10Q9BZW7 698 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 SEC14L3Q9UDX4 400 aa11.97□□□□□ -0.49
SKA1-205ENST00000494518 LOC102723996A0A087X1L8 192 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 A0A1W2PQ72 361 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 OR5H15A6NDH6 313 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 E7ENX8 843 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 GOLGA8MH3BSY2 632 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 AP3B1O00203 1094 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 CCL21O00585 134 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 CEP104O60308 925 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 PHF2O75151 1096 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 IL1RNP18510 177 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 CXCR5P32302 372 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 AVPR1BP47901 424 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 TAP2Q03519 686 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 GPS1Q13098 491 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
SKA1-205ENST00000494518 ARHGAP19Q14CB8 494 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 INAQ16352 499 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 TTLL9Q3SXZ7 439 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 GARNL3Q5VVW2 1013 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 ZNF549Q6P9A3 640 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 TMEM205Q6UW68 189 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 RIPOR1Q6ZS17 1223 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 PIWIL4Q7Z3Z4 852 aaKnown RBP11.96□□□□□ -0.49
SKA1-205ENST00000494518 CPNE9Q8IYJ1 553 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 PRELID2Q8N945 189 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 SUN3Q8TAQ9 357 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 METTL21AQ8WXB1 218 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 RELTQ969Z4 430 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.49
SKA1-205ENST00000494518 IMMP1LQ96LU5 166 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 TCF12Q99081 682 aa11.96□□□□□ -0.49
SKA1-205ENST00000494518 HES7Q9BYE0 225 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms