RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 RPUSD3Q6P087 351 aaKnown RBP4.54□□□□□ -1.68
SSB-212ENST00000494051 FRRS1Q6ZNA5 592 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 SLC24A5Q71RS6 500 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 LRTM2Q8N967 370 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 CCDC89Q8N998 374 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 Q8NBF4 154 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 AQP11Q8NBQ7 271 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 CCDC191Q8NCU4 936 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 OR5T2Q8NGG2 359 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 PGM2Q96G03 612 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 SPATA33Q96N06 139 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 BTBD9Q96Q07 612 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 CDCA3Q99618 268 aaPredicted RBP4.54□□□□□ -1.68
SSB-212ENST00000494051 TDRD1Q9BXT4 1180 aaKnown RBP4.54□□□□□ -1.68
SSB-212ENST00000494051 HOXD1Q9GZZ0 328 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 SDCBP2Q9H190 292 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 MUTYHQ9UIF7 546 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 SMAD5-AS1Q9Y6J3 95 aa4.54□□□□□ -1.68
SSB-212ENST00000494051 COL2A1P02458 1487 aaPredicted RBP4.54□□□□□ -1.68
SSB-212ENST00000494051 A8MXE2 369 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 DSCR10P59022 87 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 COG2Q14746 738 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 PTGISQ16647 500 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 KRT71Q3SY84 523 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 GLIPR1L2Q4G1C9 344 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 CHST3Q7LGC8 479 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 RCOR2Q8IZ40 523 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 OR8H2Q8N162 312 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 LYG1Q8N1E2 194 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 PRSS33Q8NF86 280 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 CNDP2Q96KP4 475 aaKnown RBP4.53□□□□□ -1.68
SSB-212ENST00000494051 PRICKLE1Q96MT3 831 aaPredicted RBP4.53□□□□□ -1.68
SSB-212ENST00000494051 FAM218AQ96MZ4 157 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 AGAP4Q96P64 663 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 NAA11Q9BSU3 229 aaPredicted RBP4.53□□□□□ -1.68
SSB-212ENST00000494051 FAM129AQ9BZQ8 928 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 SNX25Q9H3E2 840 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 RIMS4Q9H426 269 aaPredicted RBP4.53□□□□□ -1.68
SSB-212ENST00000494051 FN3KQ9H479 309 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 ACTL8Q9H568 366 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 KLK13Q9UKR3 277 aa4.53□□□□□ -1.68
SSB-212ENST00000494051 CCDC175P0C221 793 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 STAG3L1P0CL83 205 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 ACADSP16219 412 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 ACAT1P24752 427 aaKnown RBP4.52□□□□□ -1.69
SSB-212ENST00000494051 RBMS1P29558 406 aaKnown RBP4.52□□□□□ -1.69
SSB-212ENST00000494051 PDHA2P29803 388 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 SFTPDP35247 375 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 MTCP1P56278 107 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 DCDC1P59894 354 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 CACNG1Q06432 222 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 FAM189A2Q15884 450 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 ZNF343Q6P1L6 599 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 CYB5D1Q6P9G0 228 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 ENPP7Q6UWV6 458 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 PPP1R21Q6ZMI0 780 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 ZER1Q7Z7L7 766 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 GPC2Q8N158 579 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 METTL4Q8N3J2 472 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 C9orf43Q8TAL5 461 aaPredicted RBP4.52□□□□□ -1.69
SSB-212ENST00000494051 PYCR2Q96C36 320 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 CNRIP1Q96F85 164 aaPredicted RBP4.52□□□□□ -1.69
SSB-212ENST00000494051 NDNQ99608 321 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 SLC25A23Q9BV35 468 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 KATNB1Q9BVA0 655 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 ST6GALNAC4Q9H4F1 302 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 EGLN3Q9H6Z9 239 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 RNF121Q9H920 327 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 CCDC177Q9NQR7 707 aaPredicted RBP4.52□□□□□ -1.69
SSB-212ENST00000494051 NDE1Q9NXR1 346 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 PKD2L2Q9NZM6 624 aa4.52□□□□□ -1.69
SSB-212ENST00000494051 ELF5Q9UKW6 265 aaPredicted RBP4.52□□□□□ -1.69
SSB-212ENST00000494051 EPM2AB3EWF7 344 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 PLOD3O60568 738 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 PENKP01210 267 aaPredicted RBP4.51□□□□□ -1.69
SSB-212ENST00000494051 F3P13726 295 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 GATA1P15976 413 aaPredicted RBP4.51□□□□□ -1.69
SSB-212ENST00000494051 SHC1P29353 583 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 SLC8A3P57103 927 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 IRX4P78413 519 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 OR4C11Q6IEV9 310 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 GPRIN3Q6ZVF9 776 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 TCEANCQ8N8B7 351 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 GBP7Q8N8V2 638 aaPredicted RBP4.51□□□□□ -1.69
SSB-212ENST00000494051 CCDC63Q8NA47 563 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 OR4C15Q8NGM1 316 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 C11orf45Q8TAV5 145 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 MIPOL1Q8TD10 442 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 ATXN7L3BQ96GX2 97 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 RMDN2Q96LZ7 410 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 RPS10P5Q9NQ39 176 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 LNPEPQ9UIQ6 1025 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 CCL27Q9Y4X3 112 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 LIPGQ9Y5X9 500 aa4.51□□□□□ -1.69
SSB-212ENST00000494051 MYH15Q9Y2K3 1946 aa4.5□□□□□ -1.69
SSB-212ENST00000494051 LOC105371242A0A075B767 164 aa4.5□□□□□ -1.69
SSB-212ENST00000494051 IGHV3OR16-10A0A075B7F0 116 aa4.5□□□□□ -1.69
SSB-212ENST00000494051 A0A1W2PPW3 197 aa4.5□□□□□ -1.69
SSB-212ENST00000494051 ASB14A6NK59 587 aa4.5□□□□□ -1.69
SSB-212ENST00000494051 CEACAM4O75871 244 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms