RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TMEM151BQ8IW70 566 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 MSRB3Q8IXL7 192 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 LILRB2Q8N423 598 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 OR10Q1Q8NGQ4 319 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 NUS1Q96E22 293 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 MED8Q96G25 268 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 APOLD1Q96LR9 279 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 FOPNLQ96NB1 174 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 FAM129BQ96TA1 746 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.28
VCP-207ENST00000493886 ING2Q9H160 280 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 EPHX3Q9H6B9 360 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 HPS4Q9NQG7 708 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 SLC25A37Q9NYZ2 338 aa13.33□□□□□ -0.28
VCP-207ENST00000493886 NOBOXO60393 691 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 C6P13671 934 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 AMD1P17707 334 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 SDC1P18827 310 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 PHC1P78364 1004 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 CYP4F3Q08477 520 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 BCL2A1Q16548 175 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 C9orf50Q5SZB4 431 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 TBC1D21Q8IYX1 336 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 FAM9CQ8IZT9 166 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 RNF175Q8N4F7 328 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 TMBIM1Q969X1 311 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 THUMPD3Q9BV44 507 aaKnown RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 TMEM245Q9H330 911 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 CARS2Q9HA77 564 aaKnown RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 GULP1Q9UBP9 304 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 MUC22E2RYF6 1773 aaPredicted RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 E7EQ34 232 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 MMP20O60882 483 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 PAPLNO95428 1278 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 ZNF182P17025 639 aaPredicted RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 GGT1P19440 569 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 S100A3P33764 101 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 MAPK9P45984 424 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 GPR1P46091 355 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 NUP107P57740 925 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 ZNF658BQ4V348 819 aaPredicted RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 RAET1GQ6H3X3 334 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 ZNF765Q7L2R6 523 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 SAMD14Q8IZD0 417 aaPredicted RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 TERB1Q8NA31 727 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 BPIFB6Q8NFQ5 453 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 OR10A6Q8NH74 314 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 PPP1R16AQ96I34 528 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 PKP4Q99569 1192 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 ZCCHC2Q9C0B9 1178 aaKnown RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 OR2AG1Q9H205 316 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 IKZF5Q9H5V7 419 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 SMURF2Q9HAU4 748 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 FANCEQ9HB96 536 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 EXD2Q9NVH0 621 aa13.32□□□□□ -0.28
VCP-207ENST00000493886 FAM32AQ9Y421 112 aaKnown RBP13.32□□□□□ -0.28
VCP-207ENST00000493886 H3BM21 787 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 NPC1O15118 1278 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 LZTS3O60299 673 aaPredicted RBP13.31□□□□□ -0.28
VCP-207ENST00000493886 SLC16A8O95907 504 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 PRKACBP22694 351 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 IMPA1P29218 277 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 DOC2AQ14183 400 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 GTDC1Q4AE62 458 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 BCL7AQ4VC05 210 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 RUNDC3AQ59EK9 446 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 ENPP6Q6UWR7 440 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 DNAJC5GQ8N7S2 189 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 OR2T12Q8NG77 320 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 FNDC8Q8TC99 324 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 TBC1D3BA6NDS4 549 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 J3QRK9 145 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 LILRB5O75023 590 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 ANXA6P08133 673 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 ACPPP15309 386 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 S100A1P23297 94 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 ZNF33BQ06732 778 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 PDGFRLQ15198 375 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 NOXRED1Q6NXP6 359 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 TRAPPC5Q8IUR0 188 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 KLHDC8AQ8IYD2 350 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 ALDH16A1Q8IZ83 802 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 AADATQ8N5Z0 425 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 OR56A3Q8NH54 315 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 WDR20Q8TBZ3 569 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 CCDC115Q96NT0 180 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 NTN4Q9HB63 628 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 DYRK4Q9NR20 520 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 THG1LQ9NWX6 298 aaKnown RBP13.31□□□□□ -0.28
VCP-207ENST00000493886 PPT2Q9UMR5 302 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 ATG2AQ2TAZ0 1938 aa13.31□□□□□ -0.28
VCP-207ENST00000493886 TRBV5-3A0A0A0MS03 114 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 TMCC2O75069 709 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 GMNNO75496 209 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 CDH1P12830 882 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 PCSK2P16519 638 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 MATN1P21941 496 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms