RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 B3GNT4Q9C0J1 378 aa19.58■□□□□ 0.72
RNF40-203ENST00000493683 RPF2Q9H7B2 306 aaKnown RBP19.58■□□□□ 0.72
RNF40-203ENST00000493683 SPEF1Q9Y4P9 236 aa19.58■□□□□ 0.72
RNF40-203ENST00000493683 A0A1B0GVC2 190 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 CXorf49A8MYA2 514 aaPredicted RBP19.57■□□□□ 0.72
RNF40-203ENST00000493683 C8AP07357 584 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 ZNF45Q02386 682 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 GALNT2Q10471 571 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 TBC1D25Q3MII6 688 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 TIGD5Q53EQ6 642 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 SLC36A4Q6YBV0 504 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 GOLGA7Q7Z5G4 137 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 AKAP1Q92667 903 aaKnown RBP eCLIP19.57■□□□□ 0.722e-6■■■■□ 20.7
RNF40-203ENST00000493683 SUSD3Q96L08 255 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 TCRBV7S3A2A0A539 114 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 SLC19A2O60779 497 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 PRLP01236 227 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 BMP8BP34820 402 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 SLC25A11Q02978 314 aaKnown RBP19.57■□□□□ 0.72
RNF40-203ENST00000493683 MADCAM1Q13477 382 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 SEC23BQ15437 767 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 BMP8AQ7Z5Y6 402 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 SGCDQ92629 289 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 MOAP1Q96BY2 351 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 ADAD1Q96M93 576 aaKnown RBP19.57■□□□□ 0.72
RNF40-203ENST00000493683 ZNF69Q9UC07 566 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 SLIT2O94813 1529 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 WASHC1A8K0Z3 465 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 WASH3PC4AMC7 463 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 SIX3O95343 332 aaPredicted RBP19.57■□□□□ 0.72
RNF40-203ENST00000493683 GPX6P59796 221 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 WASH2PQ6VEQ5 465 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 LRRTM4Q86VH4 590 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 THOC6Q86W42 341 aaKnown RBP19.57■□□□□ 0.72
RNF40-203ENST00000493683 HDAC2Q92769 488 aaKnown RBP19.57■□□□□ 0.72
RNF40-203ENST00000493683 CDK15Q96Q40 435 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 MMP27Q9H306 513 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 PCDHB16Q9NRJ7 776 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 PDLIM1O00151 329 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 USP2O75604 605 aaPredicted RBP19.57■□□□□ 0.72
RNF40-203ENST00000493683 GRSF1Q12849 480 aaKnown RBP eCLIP19.57■□□□□ 0.72
RNF40-203ENST00000493683 SYPL2Q5VXT5 272 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 IL4I1Q96RQ9 567 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 GLTPD2A6NH11 291 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 PCP4L1A6NKN8 68 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 H3BSA7 217 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 ELNP15502 786 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 DCKP27707 260 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 GRK5P34947 590 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 PGDP52209 483 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 TMEM175Q9BSA9 504 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 HCN4Q9Y3Q4 1203 aa19.57■□□□□ 0.72
RNF40-203ENST00000493683 GMFGO60234 142 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 AHSGP02765 367 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 SLURP2P0DP57 97 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 TMBIM6P55061 237 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 NPAS3Q8IXF0 933 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 ZNF516Q92618 1163 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 HSH2DQ96JZ2 352 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 PIGVQ9NUD9 493 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 PRKAB1Q9Y478 270 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 S100A2P29034 98 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 TRAM1Q15629 374 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 FBXL22Q6P050 247 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 SLC2A7Q6PXP3 512 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 ARL9Q6T311 187 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 ASB18Q6ZVZ8 466 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 OR4F6Q8NGB9 312 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 OR2AP1Q8NGE2 309 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 RPL10LQ96L21 214 aaKnown RBP19.56■□□□□ 0.72
RNF40-203ENST00000493683 DGAT2Q96PD7 388 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 CD180Q99467 661 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 NLGN3Q9NZ94 848 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 ITGB1P05556 798 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 BCHEP06276 602 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 CDH11P55287 796 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 OSTF1Q92882 214 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 TBX5Q99593 518 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 NUDT15Q9NV35 164 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 CDH10Q9Y6N8 788 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 PRSS51A0A1B0GVH4 220 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 HPRP00739 348 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 ALPK1Q96QP1 1244 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 TPT1P8Q9HAU6 139 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 AMBNQ9NP70 447 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 ERVK-11Q9UQG0 969 aa19.56■□□□□ 0.72
RNF40-203ENST00000493683 A0A0G2JLL6 359 aaPredicted RBP19.55■□□□□ 0.72
RNF40-203ENST00000493683 ISPDA4D126 451 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 OR12D2P58182 307 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 SERINC3Q13530 473 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 PRRT2Q7Z6L0 340 aaPredicted RBP19.55■□□□□ 0.72
RNF40-203ENST00000493683 SLC22A16Q86VW1 577 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 HDDC3Q8N4P3 179 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 RIOK2Q9BVS4 552 aaKnown RBP19.55■□□□□ 0.72
RNF40-203ENST00000493683 SCML2Q9UQR0 700 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 TGFB1P01137 390 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 HSD11B1P28845 292 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 NRIP1P48552 1158 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 CLEC12AQ5QGZ9 265 aa19.55■□□□□ 0.72
RNF40-203ENST00000493683 CEP97Q8IW35 865 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms