RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PPHLN1Q8NEY8 458 aaKnown RBP16.7■□□□□ 0.26
NUP50-218ENST00000493456 OR9A1PQ8NGU1 263 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 AGAP11Q8TF27 550 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 CA5BP1Q8WTZ4 195 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 VKORC1Q9BQB6 163 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 TSPAN10Q9H1Z9 355 aaPredicted RBP16.7■□□□□ 0.26
NUP50-218ENST00000493456 SYNPO2LQ9H987 977 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 KLHL1Q9NR64 748 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 NPIPA1Q9UND3 350 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 MAP1AP78559 2803 aaPredicted RBP16.69■□□□□ 0.26
NUP50-218ENST00000493456 ZNF839A8K0R7 811 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 H0YIG0 161 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 CDK2AP1O14519 115 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 CD3EAPO15446 510 aaKnown RBP16.69■□□□□ 0.26
NUP50-218ENST00000493456 ASNA1O43681 348 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 FDFT1P37268 417 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 MAT1AQ00266 395 aaKnown RBP16.69■□□□□ 0.26
NUP50-218ENST00000493456 PRDX1Q06830 199 aaKnown RBP16.69■□□□□ 0.26
NUP50-218ENST00000493456 KLF1Q13351 362 aaPredicted RBP16.69■□□□□ 0.26
NUP50-218ENST00000493456 ANKRD20A4Q4UJ75 823 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 FCRLBQ6BAA4 426 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 SUSD1Q6UWL2 747 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 SLC35B2Q8TB61 432 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 CYTH2Q99418 400 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 TRIM51Q9BSJ1 452 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 KCNK13Q9HB14 408 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 COQ3Q9NZJ6 369 aa16.69■□□□□ 0.26
NUP50-218ENST00000493456 MARCH4Q9P2E8 410 aaPredicted RBP16.69■□□□□ 0.26
NUP50-218ENST00000493456 R3HDM2Q9Y2K5 976 aaKnown RBP16.69■□□□□ 0.26
NUP50-218ENST00000493456 IGHV3-20A0A0C4DH32 117 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 E7EVH7 732 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 MYO1CO00159 1063 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 PRRG2O14669 202 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 NDUFS3O75489 264 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 CYLC1P35663 651 aaPredicted RBP16.68■□□□□ 0.26
NUP50-218ENST00000493456 HSD17B2P37059 387 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 CD96P40200 585 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 AGTR2P50052 363 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 NAP1L1P55209 391 aaKnown RBP16.68■□□□□ 0.26
NUP50-218ENST00000493456 TBX2Q13207 712 aaPredicted RBP16.68■□□□□ 0.26
NUP50-218ENST00000493456 PTK6Q13882 451 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 GBX1Q14549 363 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 MINDY4Q4G0A6 757 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 MFSD4BQ5TF39 518 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 ICE2Q659A1 982 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 LANCL3Q6ZV70 420 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 NCCRP1Q6ZVX7 275 aaPredicted RBP16.68■□□□□ 0.26
NUP50-218ENST00000493456 CRLF3Q8IUI8 442 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 AMER2Q8N7J2 671 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 M1APQ8TC57 530 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 DMRTA2Q96SC8 542 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 HES7Q9BYE0 225 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 ETNK1Q9HBU6 452 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 MMP25Q9NPA2 562 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 FAM114A2Q9NRY5 505 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 TAC3Q9UHF0 121 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 PCYOX1Q9UHG3 505 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 NEU2Q9Y3R4 380 aa16.68■□□□□ 0.26
NUP50-218ENST00000493456 ARHGEF33A8MVX0 844 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 P2RX6O15547 441 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 NSA2O95478 260 aaKnown RBP16.67■□□□□ 0.26
NUP50-218ENST00000493456 STIP1P31948 543 aaKnown RBP16.67■□□□□ 0.26
NUP50-218ENST00000493456 GRIA1P42261 906 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 EIF3BP55884 814 aaKnown RBP16.67■□□□□ 0.26
NUP50-218ENST00000493456 ABATP80404 500 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.67■□□□□ 0.26
NUP50-218ENST00000493456 SPINK14Q6IE38 97 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 GALNTL5Q7Z4T8 443 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 DOLPP1Q86YN1 238 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 LGI4Q8N135 537 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 SLC5A8Q8N695 610 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 MCOLN3Q8TDD5 553 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 SDCCAG3Q96C92 435 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 EBNA1BP2Q99848 306 aaKnown RBP16.67■□□□□ 0.26
NUP50-218ENST00000493456 ANKRD10Q9NXR5 420 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 PPT2Q9UMR5 302 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 SCN2AQ99250 2005 aa16.67■□□□□ 0.26
NUP50-218ENST00000493456 SOWAHDA6NJG2 315 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 GABRR3A8MPY1 467 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 BTNL10A8MVZ5 291 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 FOXO6A8MYZ6 492 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 SP1P08047 785 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 ZNF24P17028 368 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 PNLIPRP1P54315 467 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 TSTA3Q13630 321 aaPredicted RBP16.66■□□□□ 0.26
NUP50-218ENST00000493456 PCID2Q5JVF3 399 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 CTSL3PQ5NE16 218 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 ADCK2Q7Z695 626 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 ANKRD37Q7Z713 158 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 PCGF5Q86SE9 256 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 UBL4BQ8N7F7 174 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 LRRC57Q8N9N7 239 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 TC2NQ8N9U0 490 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 OR9A4Q8NGU2 314 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 NPAS2Q99743 824 aa16.66■□□□□ 0.26
NUP50-218ENST00000493456 H3BMM5 538 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 ADAM10O14672 748 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 HAT1O14929 419 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 DIAPH2O60879 1101 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 PSIP1O75475 530 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms