RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 NUDT9Q9BW91 350 aa14.37□□□□□ -0.11
USP39-217ENST00000491659 SGPP1Q9BX95 441 aa14.37□□□□□ -0.11
USP39-217ENST00000491659 DRC3Q9H069 523 aa14.37□□□□□ -0.11
USP39-217ENST00000491659 CLMPQ9H6B4 373 aa14.37□□□□□ -0.11
USP39-217ENST00000491659 SYNPO2LQ9H987 977 aa14.37□□□□□ -0.11
USP39-217ENST00000491659 SEMA3GQ9NS98 782 aa14.37□□□□□ -0.11
USP39-217ENST00000491659 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
USP39-217ENST00000491659 NPEPPSL1A6NEC2 478 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 VSTM2BA6NLU5 285 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 P2RX6O15547 441 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 ALPPP05187 535 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 GSTA2P09210 222 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 CDH1P12830 882 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 AVPR1BP47901 424 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 RAPSNQ13702 412 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 ZNF460Q14592 562 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 TUBB8Q3ZCM7 444 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 VWA5B1Q5TIE3 1220 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 C8orf74Q6P047 294 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 SBSNQ6UWP8 590 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 CCDC25Q86WR0 208 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 TMEM151BQ8IW70 566 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 STT3BQ8TCJ2 826 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 FBXL8Q96CD0 374 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 MMABQ96EY8 250 aaPredicted RBP14.36□□□□□ -0.11
USP39-217ENST00000491659 TSPAN17Q96FV3 270 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 YIPF2Q9BWQ6 316 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 POPDC3Q9HBV1 291 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 GPAMQ9HCL2 828 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 ATP13A2Q9NQ11 1180 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 SMYD2Q9NRG4 433 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 C14orf105Q9NVL8 296 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 TRPC4Q9UBN4 977 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 FBXL4Q9UKA2 621 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 SH2B3Q9UQQ2 575 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 TENM4Q6N022 2769 aa14.36□□□□□ -0.11
USP39-217ENST00000491659 IGLV3-12A0A075B6K2 115 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 TCRBV9S1A1TA0A576 114 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 SOCS6O14544 535 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 STATHP02808 62 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 ZGLP1P0C6A0 271 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 CCR8P51685 355 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 TAS2R39P59534 338 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 CSNK1G2P78368 415 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 POU4F1Q01851 419 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 KLC1Q07866 573 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 AIMP2Q13155 320 aaKnown RBP14.35□□□□□ -0.11
USP39-217ENST00000491659 FAM53BQ14153 422 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 MYBPC3Q14896 1274 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 IRAK1BP1Q5VVH5 260 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 TMEM207Q6UWW9 146 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 FRA10AC1Q70Z53 315 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 ADAMTSL2Q86TH1 951 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 PRSS58Q8IYP2 241 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 TBC1D19Q8N5T2 526 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 OR56A3Q8NH54 315 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 FBXO25Q8TCJ0 367 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 ANKRD7Q92527 254 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 PYCR2Q96C36 320 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 SMAD5Q99717 465 aaKnown RBP14.35□□□□□ -0.11
USP39-217ENST00000491659 CPNE1Q99829 537 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 EGFL8Q99944 293 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 FAM129AQ9BZQ8 928 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 MKKSQ9NPJ1 570 aaPredicted RBP14.35□□□□□ -0.11
USP39-217ENST00000491659 C5AR2Q9P296 337 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 C3orf18Q9UK00 162 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 IKZF3Q9UKT9 509 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 HS3ST3B1Q9Y662 390 aa14.35□□□□□ -0.11
USP39-217ENST00000491659 KCNE1BA0A087WTH5 132 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 A0A0A6YYC8 382 aaPredicted RBP14.34□□□□□ -0.11
USP39-217ENST00000491659 FEZF1A0PJY2 475 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 I3L1I5 382 aaPredicted RBP14.34□□□□□ -0.11
USP39-217ENST00000491659 CDC7O00311 574 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 MAP2K7O14733 419 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 PIAS1O75925 651 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 URI1O94763 535 aaPredicted RBP14.34□□□□□ -0.11
USP39-217ENST00000491659 IPO13O94829 963 aaKnown RBP14.34□□□□□ -0.11
USP39-217ENST00000491659 ZIC2O95409 532 aaPredicted RBP14.34□□□□□ -0.11
USP39-217ENST00000491659 SLC35G6P0C7Q6 338 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 ACPPP15309 386 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 ITGA3P26006 1051 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 STX2P32856 288 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 SLC26A3P40879 764 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 BCL6P41182 706 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 PPP1R3AQ16821 1122 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 WHAMMP3Q1A5X7 153 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 NADK2Q4G0N4 442 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 VWA2Q5GFL6 755 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 C3orf62Q6ZUJ4 267 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 VN1R4Q7Z5H5 301 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 ASPGQ86U10 573 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 CEP97Q8IW35 865 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 CTAGE3PQ8IX95 158 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 CAMKVQ8NCB2 501 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 RBBP8Q99708 897 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 CTNNAL1Q9UBT7 734 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 DYRK1BQ9Y463 629 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 MAP4K5Q9Y4K4 846 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 OARD1Q9Y530 152 aa14.34□□□□□ -0.11
USP39-217ENST00000491659 FAM159BA6NKW6 160 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms