RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CHMP2BQ9UQN3 213 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 RUVBL1Q9Y265 456 aaKnown RBP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 HS3ST3B1Q9Y662 390 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 KCNE1BA0A087WTH5 132 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 KRT87PA6NCN2 255 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 E7ESA3 106 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 H0YIG0 161 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 CNOT3O75175 753 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 AHSGP02765 367 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 CYC1P08574 325 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 SLC35G6P0C7Q6 338 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 ITGA8P53708 1063 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 TBPL1P62380 186 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 NAE1Q13564 534 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 TLR1Q15399 786 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 MFSD4BQ5TF39 518 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 STEAP4Q687X5 459 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 DUPD1Q68J44 220 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 PAQR3Q6TCH7 311 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 KIRREL2Q6UWL6 708 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 ISLR2Q6UXK2 745 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 NKAPQ8N5F7 415 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 RBMXL3Q8N7X1 1067 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 OR11G2Q8NGC1 345 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 PPP4R1Q8TF05 950 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 LMF1Q96S06 567 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 KRT12Q99456 494 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 ERP44Q9BS26 406 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 LUZP4Q9P127 313 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 STOX2Q9P2F5 926 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 PDE10AQ9Y233 779 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 UTP11Q9Y3A2 253 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 TEX264Q9Y6I9 313 aa15.76■□□□□ 0.11
PDLIM2-217ENST00000491330 IGLV3-12A0A075B6K2 115 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 A0A0A6YYC8 382 aaPredicted RBP15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 URADA6NGE7 173 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 IDSB3KWA1 339 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 I3L1I5 382 aaPredicted RBP15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 SOCS6O14544 535 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 HAT1O14929 419 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 SNRNP200O75643 2136 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 IL10P22301 178 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 CCR8P51685 355 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 MGAT5Q09328 741 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 HKDC1Q2TB90 917 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 CRB2Q5IJ48 1285 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 HECTD2Q5U5R9 776 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 LCTLQ6UWM7 567 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 SYT10Q6XYQ8 523 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 COX15Q7KZN9 410 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 AGGF1Q8N302 714 aaeCLIP15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 SUN3Q8TAQ9 357 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 CNDP1Q96KN2 507 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 TRIM31Q9BZY9 425 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 TGIF2Q9GZN2 237 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 ATG10Q9H0Y0 220 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 MKL2Q9ULH7 1088 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 MED16Q9Y2X0 877 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 DYRK1BQ9Y463 629 aa15.75■□□□□ 0.11
PDLIM2-217ENST00000491330 FANCGO15287 622 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 SAT1P21673 171 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 GNLYP22749 145 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 SLC26A3P40879 764 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 CDC16Q13042 620 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 PDIA2Q13087 525 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 CSHL1Q14406 222 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 PLEKHN1Q494U1 663 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 VWA2Q5GFL6 755 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 HP1BP3Q5SSJ5 553 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 TEDDM1Q5T9Z0 273 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 B3GNTL1Q67FW5 361 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 RIPOR1Q6ZS17 1223 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 FRA10AC1Q70Z53 315 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 CYS1Q717R9 158 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 ASPGQ86U10 573 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 SLC26A11Q86WA9 606 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 CISD2Q8N5K1 135 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 SLC13A3Q8WWT9 602 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 C10orf90Q96M02 699 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 ZNF160Q9HCG1 818 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 CUEDC1Q9NWM3 386 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 ABI3Q9P2A4 366 aa15.74■□□□□ 0.11
PDLIM2-217ENST00000491330 SPTBP11277 2137 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 IGKV1-8A0A0C4DH67 115 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 NSA2O95478 260 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 SERPINA7P05543 415 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 GSTA2P09210 222 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 C8orf89P0DMQ9 161 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 ARG2P78540 354 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 RGS1Q08116 209 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 HERC3Q15034 1050 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 MINDY4Q4G0A6 757 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 Q6ZS92 163 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 CEP128Q6ZU80 1094 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 PRR7Q8TB68 274 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 PYROXD1Q8WU10 500 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 ANKRD7Q92527 254 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 TSPAN17Q96FV3 270 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 TRIM51Q9BSJ1 452 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 TUBB6Q9BUF5 446 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms