RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 VAPAQ9P0L0 249 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 PLXNA1Q9UIW2 1896 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 KRT87PA6NCN2 255 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 ADAMTS4O75173 837 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 RECQL5O94762 991 aaPredicted RBP9.88□□□□□ -0.83
BRD9-209ENST00000490814 DIRAS1O95057 198 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 LRATO95237 230 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 LCKP06239 509 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 HOXD8P13378 290 aaPredicted RBP9.88□□□□□ -0.83
BRD9-209ENST00000490814 CTPS1P17812 591 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 RGRP47804 291 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 SOX9P48436 509 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 IL10RBQ08334 325 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 CSTF3Q12996 717 aaKnown RBP9.88□□□□□ -0.83
BRD9-209ENST00000490814 ALKBH2Q6NS38 261 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 AFTPHQ6ULP2 937 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 AHSA2Q719I0 299 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 SLC22A15Q8IZD6 547 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 OR8H2Q8N162 312 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 IL17RDQ8NFM7 739 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 OR4F6Q8NGB9 312 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 BTN2A3PQ96KV6 586 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 NSUN3Q9H649 340 aaKnown RBP9.88□□□□□ -0.83
BRD9-209ENST00000490814 KAT8Q9H7Z6 458 aaKnown RBP9.88□□□□□ -0.83
BRD9-209ENST00000490814 IPPKQ9H8X2 491 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 USE1Q9NZ43 259 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 CYB5R1Q9UHQ9 305 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 CACNG2Q9Y698 323 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 PLD2O14939 933 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 HOXC13P31276 330 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 DDOSTP39656 456 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 EIF2DP41214 584 aaKnown RBP9.88□□□□□ -0.83
BRD9-209ENST00000490814 HTR3AP46098 478 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 GABARAPL2P60520 117 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 ISL1P61371 349 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 ERVK-21P61565 698 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 EMX2Q04743 252 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 SERINC3Q13530 473 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 ABRAXAS2Q15018 415 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 CTXN3Q4LDR2 81 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 DPY19L3Q6ZPD9 716 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 NOXA1Q86UR1 476 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 PHC2Q8IXK0 858 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 RIMKLAQ8IXN7 391 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 KRTCAP2Q8N6L1 136 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 DYNC2LI1Q8TCX1 351 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 MSANTD3Q96H12 275 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 MYOCQ99972 504 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 CDADC1Q9BWV3 514 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 GPR63Q9BZJ6 419 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 C11orf49Q9H6J7 331 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 ATP13A1Q9HD20 1204 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 AMBNQ9NP70 447 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 TMEM248Q9NWD8 314 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 SLC39A1Q9NY26 324 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 WWOXQ9NZC7 414 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 ZNF639Q9UID6 485 aa9.88□□□□□ -0.83
BRD9-209ENST00000490814 NUP214P35658 2090 aaPredicted RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 A0A1W2PRG6 482 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 ZNF780AO75290 641 aaPredicted RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 CYP11A1P05108 521 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 HOXB8P17481 243 aaPredicted RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 OGNP20774 298 aaKnown RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 DEFA1P59665 94 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 DEFA3P59666 94 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 KRR1Q13601 381 aaKnown RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 ZNF181Q2M3W8 571 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 ZNF404Q494X3 552 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 SPANXN4Q5MJ08 99 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 CACHD1Q5VU97 1274 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 Q6ZSR9 355 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 GALNT10Q86SR1 603 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 ZNF280BQ86YH2 543 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 ADHFE1Q8IWW8 467 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 PM20D2Q8IYS1 436 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 CLDN19Q8N6F1 224 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 FAM120BQ96EK7 910 aaKnown RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 ST6GAL2Q96JF0 529 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 FBXO44Q9H4M3 255 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 CARS2Q9HA77 564 aaKnown RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 ZBTB20Q9HC78 741 aaPredicted RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 EIF3KQ9UBQ5 218 aaKnown RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 GMPPBQ9Y5P6 360 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 SPTBN2O15020 2390 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 LOC285095A0A1B0GVY8 99 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 RGS10O43665 173 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 AIREO43918 545 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 ADAM11O75078 769 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 DNTTP04053 509 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 RPS17P08708 135 aaKnown RBP9.87□□□□□ -0.83
BRD9-209ENST00000490814 PCMT1P22061 227 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 CSTF2P33240 577 aaKnown RBP eCLIP9.87□□□□□ -0.83
BRD9-209ENST00000490814 HTR7P34969 479 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 HK3P52790 923 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 SEMG2Q02383 582 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 GALEQ14376 348 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 CPSF6Q16630 551 aaKnown RBP eCLIP9.87□□□□□ -0.832e-7■■■□□ 16.2
BRD9-209ENST00000490814 TMPRSS9Q7Z410 1059 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 ZFAND4Q86XD8 727 aa9.87□□□□□ -0.83
BRD9-209ENST00000490814 SLC13A3Q8WWT9 602 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms