RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 NME5P56597 212 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 CYLC2Q14093 348 aaPredicted RBP20.8■□□□□ 0.92
SMC4-221ENST00000489573 SIM2Q14190 667 aaPredicted RBP20.8■□□□□ 0.92
SMC4-221ENST00000489573 KIAA0040Q15053 153 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 OGFOD3Q6PK18 319 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 GK5Q6ZS86 529 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 FAM20CQ8IXL6 584 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 PARP9Q8IXQ6 854 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.8■□□□□ 0.925e-13■■■■■ 220.5
SMC4-221ENST00000489573 APIPQ96GX9 242 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 LRMDAQ9H2I8 198 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 ACTR10Q9NZ32 417 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 TMED5Q9Y3A6 229 aa20.8■□□□□ 0.92
SMC4-221ENST00000489573 ZDBF2Q9HCK1 2354 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 GSAPA4D1B5 854 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 CD1EP15812 388 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 UGT2B7P16662 529 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 PTPN4P29074 926 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 SERPINB1P30740 379 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 CACHD1Q5VU97 1274 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 KIAA1614Q5VZ46 1190 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 CYP20A1Q6UW02 462 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 ASRGL1Q7L266 308 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 RABEPKQ7Z6M1 372 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 ZNF761Q86XN6 746 aaPredicted RBP20.79■□□□□ 0.92
SMC4-221ENST00000489573 OR9I1Q8NGQ6 314 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 FLVCR1-AS1Q8TAF5 88 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 KLHL29Q96CT2 875 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 METTL2AQ96IZ6 378 aaKnown RBP20.79■□□□□ 0.92
SMC4-221ENST00000489573 OR2A14Q96R47 310 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 DPH7Q9BTV6 452 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 RHBGQ9H310 441 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 UCK1Q9HA47 277 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 NMRK1Q9NWW6 199 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 ZIM2Q9NZV7 527 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 CCDC167Q9P0B6 97 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 PPT2Q9UMR5 302 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 PCM1Q15154 2024 aa20.79■□□□□ 0.92
SMC4-221ENST00000489573 TRBC2A0A5B9 178 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 FEZF1A0PJY2 475 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 C2orf74A8MZ97 194 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 ETHE1O95571 254 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 G6PDP11413 515 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 ACPPP15309 386 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 AMD1P17707 334 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 MAPK1P28482 360 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 GRK3P35626 688 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 ACTN3Q08043 901 aaPredicted RBP20.78■□□□□ 0.92
SMC4-221ENST00000489573 BNIP3Q12983 259 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 BIRC2Q13490 618 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 SHBQ15464 509 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 DUOXA1Q1HG43 343 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 C14orf28Q4W4Y0 310 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 VN1R5Q7Z5H4 357 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 OOSP2Q86WS3 158 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 SERPINI1Q99574 410 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.78■□□□□ 0.92
SMC4-221ENST00000489573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.78■□□□□ 0.924e-98■■■■■ 943.1
SMC4-221ENST00000489573 TMEM45AQ9NWC5 275 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 SNX7Q9UNH6 387 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 PCDHGA2Q9Y5H1 932 aa20.78■□□□□ 0.92
SMC4-221ENST00000489573 FAM86C2PA6NEL3 165 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 ANKDD1BA6NHY2 528 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 LILRA5A6NI73 299 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 B2RBV5 119 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 PPM1DO15297 605 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 OR1F1O43749 312 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 DNAJC8O75937 253 aaPredicted RBP20.77■□□□□ 0.92
SMC4-221ENST00000489573 ZNF425Q6IV72 752 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 PRR23BQ6ZRT6 265 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 RINLQ6ZS11 566 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 LIX1Q8N485 282 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 TBC1D19Q8N5T2 526 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 ANKRD53Q8N9V6 530 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 GPR156Q8NFN8 814 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 CEP76Q8TAP6 659 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 FCRL1Q96LA6 429 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 APOLD1Q96LR9 279 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 TBC1D10AQ9BXI6 508 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 C11orf16Q9NQ32 467 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 HRASLS2Q9NWW9 162 aa20.77■□□□□ 0.92
SMC4-221ENST00000489573 OR5K3A6NET4 321 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 FKBP9O95302 570 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 CFIP05156 583 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SNRPB2P08579 225 aaKnown RBP20.76■□□□□ 0.91
SMC4-221ENST00000489573 EPHA8P29322 1005 aaPredicted RBP20.76■□□□□ 0.91
SMC4-221ENST00000489573 ACSM2AQ08AH3 577 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SLC5A12Q1EHB4 618 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 C6orf132Q5T0Z8 1188 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 ACSM2BQ68CK6 577 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 TRIM73Q86UV7 250 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 FUNDC1Q8IVP5 155 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SLC25A45Q8N413 288 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 KYQ8NBH2 561 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 TTLQ8NG68 377 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 RTKNQ9BST9 563 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 A0A1B0GTQ1 180 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 HAT1O14929 419 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SH3BGRLO75368 114 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SLC22A3O75751 556 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms