RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TFAP2BQ92481 460 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 CAVIN3Q969G5 261 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 LRRC45Q96CN5 670 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 MARK4Q96L34 752 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 RHNO1Q9BSD3 238 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 MAGEH1Q9H213 219 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 FAM60AQ9NP50 221 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 FAM114A2Q9NRY5 505 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 PARVAQ9NVD7 372 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 IP6K2Q9UHH9 426 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
EXOSC3-206ENST00000489414 KLHL21Q9UJP4 597 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 C3orf18Q9UK00 162 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 TMEM59LQ9UK28 342 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 ACSL5Q9ULC5 683 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 NFS1Q9Y697 457 aa7□□□□□ -1.29
EXOSC3-206ENST00000489414 LOC100289279A0A1B0GTE1 492 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 FAM234BA2RU67 622 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 GOLGA6L10A6NI86 522 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 M0QYV0 167 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 POLR3GO15318 223 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 PLXNB1O43157 2135 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 RAD51CO43502 376 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 PHF2O75151 1096 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 SASH3O75995 380 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 PAEPP09466 180 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 COL6A2P12110 1019 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF8P17098 575 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 DESP17661 470 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 POLR2CP19387 275 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ALAS2P22557 587 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 CEACAM8P31997 349 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 MC3RP41968 323 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 SSR1P43307 286 aaKnown RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 LIMS1P48059 325 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 GZMKP49863 264 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF136P52737 540 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 NOMO3P69849 1222 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 OC90Q02509 493 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 FOXL1Q12952 345 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 MEP1AQ16819 746 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ACBD5Q5T8D3 534 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 DCUN1D2Q6PH85 259 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 MON1BQ7L1V2 547 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 REC114Q7Z4M0 266 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF227Q86WZ6 799 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 PHF13Q86YI8 300 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 CRLF3Q8IUI8 442 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 DEFB106AQ8N104 65 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ZFP62Q8NB50 900 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 AENQ8WTP8 325 aaKnown RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF606Q8WXB4 792 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 RXFP2Q8WXD0 754 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 N4BP2L2Q92802 583 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 IMMP1LQ96LU5 166 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 C11orf70Q9BRQ4 267 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF700Q9H0M5 742 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 DEFB127Q9H1M4 99 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ACP6Q9NPH0 428 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 HOMER3Q9NSC5 361 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 PIGVQ9NUD9 493 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 GAR1Q9NY12 217 aaKnown RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 ATXN10Q9UBB4 475 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 FEZ2Q9UHY8 353 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 PCDHA3Q9Y5H8 950 aa6.99□□□□□ -1.29
EXOSC3-206ENST00000489414 LOC102723996A0A087X1L8 192 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 LCE6AA0A183 80 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 FAM170AA1A519 330 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 NPIPB15A6NHN6 443 aaPredicted RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ELOA3DA6NLF2 546 aaPredicted RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 EEF1E1-BLOC1S5C9J1V9 151 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 MATN2O00339 956 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 EEF1E1O43324 174 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PSTPIP1O43586 416 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PROSCO94903 275 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PRB2P02812 416 aaPredicted RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ZGLP1P0C6A0 271 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF7P17097 686 aaPredicted RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 CRYGSP22914 178 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PRDX3P30048 256 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 SRP14P37108 136 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 RGRP47804 291 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 MAPKAPK2P49137 400 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ARFIP2P53365 341 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 SNX16P57768 344 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 HILS1P60008 231 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 DR1Q01658 176 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 GUCA2AQ02747 115 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 BCL2L1Q07817 233 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 STILQ15468 1287 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 RPE65Q16518 533 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 BEAN1Q3B7T3 259 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ELOA3BQ3SY89 546 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 CCDC38Q502W7 563 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 BRMS1LQ5PSV4 323 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 DNAJC24Q6P3W2 148 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 CRTC3Q6UUV7 619 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 KDELC1Q6UW63 502 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 TTLL10Q6ZVT0 673 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 TSPAN33Q86UF1 283 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms