RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TRBC2A0A5B9 178 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 OR5K3A6NET4 321 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 LILRA5A6NI73 299 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 RHPN2P1A8MT19 583 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 NPIPB8E9PQR5 432 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 GYG2O15488 501 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 OR1F1O43749 312 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 PRICKLE3O43900 615 aaPredicted RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 NOBOXO60393 691 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 DFNA5O60443 496 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 SLC22A3O75751 556 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 KRT34O76011 436 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 FKBP9O95302 570 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 SNRPB2P08579 225 aaKnown RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 ALPPL2P10696 532 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 PRPS2P11908 318 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 ACPPP15309 386 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 PCSK2P16519 638 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 GPX3P22352 226 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 GSTM2P28161 218 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 PTPN4P29074 926 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 EPHA8P29322 1005 aaPredicted RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 FASLGP48023 281 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 RXRGP48443 463 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 MRPL19P49406 292 aaKnown RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 RAP1GDS1P52306 607 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 KCNK10P57789 538 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 CYP4F2P78329 520 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 CSNK1G2P78368 415 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 BNC1Q01954 994 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 GRIK2Q13002 908 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 STX5Q13190 355 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 CUL3Q13618 768 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 SLC5A12Q1EHB4 618 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 RFTN2Q52LD8 501 aaPredicted RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 SPIN4Q56A73 249 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 PEAR1Q5VY43 1037 aaPredicted RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 ADNP2Q6IQ32 1131 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 PAOXQ6QHF9 649 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 SPESP1Q6UW49 350 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 TRIM73Q86UV7 250 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 ZNF761Q86XN6 746 aaPredicted RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 FAM20CQ8IXL6 584 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 LIX1Q8N485 282 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 RNF175Q8N4F7 328 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 ARL10Q8N8L6 244 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 ZBTB44Q8NCP5 570 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 GPR156Q8NFN8 814 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 OR4K1Q8NGD4 311 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 METTL2AQ96IZ6 378 aaKnown RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 SLC25A23Q9BV35 468 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 ZMYND15Q9H091 742 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 TMEM45AQ9NWC5 275 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 HRASLS2Q9NWW9 162 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 CCDC167Q9P0B6 97 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 ANKMY1Q9P2S6 941 aa9.62□□□□□ -0.87
USP11-211ENST00000489111 RUVBL1Q9Y265 456 aaKnown RBP9.62□□□□□ -0.87
USP11-211ENST00000489111 IGKV1-8A0A0C4DH67 115 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 A0A0J9YY10 115 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 FEZF1A0PJY2 475 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 FAM234BA2RU67 622 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 CFAP73A6NFT4 308 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 BBIP1A8MTZ0 92 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 B2RBV5 119 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 HAT1O14929 419 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 ANGPT2O15123 496 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 SH3BGRLO75368 114 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 DNAJC8O75937 253 aaPredicted RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 UBXN7O94888 489 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 CER1O95813 267 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 SERPIND1P05546 499 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 PROS1P07225 676 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 G6PDP11413 515 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 BCKDHAP12694 445 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 AMD1P17707 334 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 PTX3P26022 381 aaPredicted RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 CAPZBP47756 277 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 NUDT2P50583 147 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 CCT8P50990 548 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 RPS15AP62244 130 aaKnown RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 YBX1P67809 324 aaKnown RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 ACTN3Q08043 901 aaPredicted RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 ZNF423Q2M1K9 1284 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 MMEL1Q495T6 779 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 DNAL1Q4LDG9 190 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 C6orf132Q5T0Z8 1188 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 KIAA1614Q5VZ46 1190 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 OGFOD3Q6PK18 319 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 PLD3Q8IV08 490 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 KIF2BQ8N4N8 673 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 C1orf52Q8N6N3 182 aaKnown RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 OR9I1Q8NGQ6 314 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 CDC26Q8NHZ8 85 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 MCUR1Q96AQ8 359 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 RCN3Q96D15 328 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 APIPQ96GX9 242 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 RAB3IPQ96QF0 476 aaPredicted RBP9.61□□□□□ -0.87
USP11-211ENST00000489111 OR2A14Q96R47 310 aa9.61□□□□□ -0.87
USP11-211ENST00000489111 RTKNQ9BST9 563 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms