RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PANK2Q9BZ23 570 aa3□□□□□ -1.93
RFC4-213ENST00000489028 NYXQ9GZU5 481 aa3□□□□□ -1.93
RFC4-213ENST00000489028 EGLN3Q9H6Z9 239 aa3□□□□□ -1.93
RFC4-213ENST00000489028 GSN-AS1Q9NRJ2 163 aa3□□□□□ -1.93
RFC4-213ENST00000489028 ANKEF1Q9NU02 776 aa3□□□□□ -1.93
RFC4-213ENST00000489028 NDE1Q9NXR1 346 aa3□□□□□ -1.93
RFC4-213ENST00000489028 ZHX2Q9Y6X8 837 aa3□□□□□ -1.93
RFC4-213ENST00000489028 MYH14Q7Z406 1995 aaKnown RBP3□□□□□ -1.93
RFC4-213ENST00000489028 ARID2Q68CP9 1835 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 URADA6NGE7 173 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 SNX3O60493 162 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 DIAPH2O60879 1101 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 CEACAM4O75871 244 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 ACHEP22303 614 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 PDHA2P29803 388 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 KRT20P35900 424 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 CAPZA2P47755 286 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 CSRP3P50461 194 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 POU5F1Q01860 360 aaKnown RBP2.99□□□□□ -1.93
RFC4-213ENST00000489028 NAA16Q6N069 864 aaPredicted RBP2.99□□□□□ -1.93
RFC4-213ENST00000489028 GDPGP1Q6ZNW5 385 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 TLK2Q86UE8 772 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 CDC20BQ86Y33 519 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 MAML2Q8IZL2 1156 aaPredicted RBP2.99□□□□□ -1.93
RFC4-213ENST00000489028 LSMEM1Q8N8F7 131 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 PI4KAP1Q8N8J0 262 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 ROBO4Q8WZ75 1007 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 SPSB1Q96BD6 273 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 TDRD1Q9BXT4 1180 aaKnown RBP2.99□□□□□ -1.93
RFC4-213ENST00000489028 TRIM6Q9C030 488 aaPredicted RBP2.99□□□□□ -1.93
RFC4-213ENST00000489028 ANKRD2Q9GZV1 360 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 HOXD1Q9GZZ0 328 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 CCDC177Q9NQR7 707 aaPredicted RBP2.99□□□□□ -1.93
RFC4-213ENST00000489028 TBC1D7Q9P0N9 293 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 C5AR2Q9P296 337 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 WIPI2Q9Y4P8 454 aa2.99□□□□□ -1.93
RFC4-213ENST00000489028 UBE2CO00762 179 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 ECE2O60344 883 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 IGHV3-13P01766 116 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 SELEP16581 610 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 ELAVL4P26378 380 aaKnown RBP2.98□□□□□ -1.93
RFC4-213ENST00000489028 SRSF9Q13242 221 aaKnown RBP eCLIP2.98□□□□□ -1.93
RFC4-213ENST00000489028 FAM189A2Q15884 450 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 MTHFSDQ2M296 383 aaKnown RBP2.98□□□□□ -1.93
RFC4-213ENST00000489028 TMEM266Q2M3C6 531 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 ARMC4Q5T2S8 1044 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 KRT39Q6A163 491 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 FCRLAQ7L513 359 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 TTC30BQ8N4P2 665 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 FAM89BQ8N5H3 189 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 TDRD5Q8NAT2 981 aaKnown RBP2.98□□□□□ -1.93
RFC4-213ENST00000489028 NOA1Q8NC60 698 aaKnown RBP2.98□□□□□ -1.93
RFC4-213ENST00000489028 C17orf47Q8NEP4 570 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 CHPT1Q8WUD6 406 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 SPATA33Q96N06 139 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 NDNQ99608 321 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 RAB11FIP5Q9BXF6 653 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 DNAI2Q9GZS0 605 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 ST6GALNAC4Q9H4F1 302 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 B3GAT2Q9NPZ5 323 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 THAP10Q9P2Z0 257 aaPredicted RBP2.98□□□□□ -1.93
RFC4-213ENST00000489028 PRDM4Q9UKN5 801 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 HEG1Q9ULI3 1381 aa2.98□□□□□ -1.93
RFC4-213ENST00000489028 IGSF1Q8N6C5 1336 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 LOC105371242A0A075B767 164 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 SYNDIG1LA6NDD5 238 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 TLX2O43763 284 aaPredicted RBP2.97□□□□□ -1.93
RFC4-213ENST00000489028 RPS6KA5O75582 802 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 SERPING1P05155 500 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 THEGLP0DJG4 465 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 PRKAR1AP10644 381 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 NOVP48745 357 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 RAB28P51157 221 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 OR1D5P58170 312 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 DCDC1P59894 354 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 CD300CQ08708 224 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 AIMP1Q12904 312 aaKnown RBP2.97□□□□□ -1.93
RFC4-213ENST00000489028 OPCMLQ14982 345 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 PTGISQ16647 500 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 LACTB2Q53H82 288 aaPredicted RBP2.97□□□□□ -1.93
RFC4-213ENST00000489028 NOTUMQ6P988 496 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 CTR9Q6PD62 1173 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 SLC24A5Q71RS6 500 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 KRT74Q7RTS7 529 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 ANKRD33Q7Z3H0 272 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 KRT77Q7Z794 578 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 METTL4Q8N3J2 472 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 LRRC15Q8TF66 581 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 METTL21AQ8WXB1 218 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 HDAC11Q96DB2 347 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 ZNF558Q96NG5 402 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 CDCA3Q99618 268 aaPredicted RBP2.97□□□□□ -1.93
RFC4-213ENST00000489028 ZNF577Q9BSK1 485 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 FZD8Q9H461 694 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 GNB4Q9HAV0 340 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 RAVER2Q9HCJ3 691 aaKnown RBP2.97□□□□□ -1.93
RFC4-213ENST00000489028 TXNDC16Q9P2K2 825 aa2.97□□□□□ -1.93
RFC4-213ENST00000489028 ELF5Q9UKW6 265 aaPredicted RBP2.97□□□□□ -1.93
RFC4-213ENST00000489028 ZNF510Q9Y2H8 683 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms