RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 TEX9Q8N6V9 391 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 CCDC63Q8NA47 563 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 TTC29Q8NA56 475 aaPredicted RBP15.28■□□□□ 0.04
HDAC7-224ENST00000488927 TTLQ8NG68 377 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 SNIP1Q8TAD8 396 aaKnown RBP15.28■□□□□ 0.04
HDAC7-224ENST00000488927 MDM1Q8TC05 714 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 PMEPA1Q969W9 287 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 WDR34Q96EX3 536 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 PTCD3Q96EY7 689 aaKnown RBP15.28■□□□□ 0.04
HDAC7-224ENST00000488927 SEC16BQ96JE7 1060 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 OR2A5Q96R48 311 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 EFCAB11Q9BUY7 163 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 C1QTNF3Q9BXJ4 246 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 ERVK-6Q9BXR3 956 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 EMCNQ9ULC0 261 aa15.28■□□□□ 0.04
HDAC7-224ENST00000488927 FITM1A5D6W6 292 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 H0YGG7 62 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 H3BMH7 237 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 E2F3O00716 465 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 HCRTR1O43613 425 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 DLX3O60479 287 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 UGDHO60701 494 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 KIAA0754O94854 1291 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 LIPCP11150 499 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 AHRP35869 848 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 CASP2P42575 452 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 PRKAA2P54646 552 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 EMP3P54852 163 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 VSX2P58304 361 aaPredicted RBP15.27■□□□□ 0.04
HDAC7-224ENST00000488927 ARF3P61204 181 aaPredicted RBP15.27■□□□□ 0.04
HDAC7-224ENST00000488927 REEP5Q00765 189 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 IRF8Q02556 426 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 GTF2H2Q13888 395 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 HIST2H2ACQ16777 129 aaPredicted RBP15.27■□□□□ 0.04
HDAC7-224ENST00000488927 KIF26BQ2KJY2 2108 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 FAM214AQ32MH5 1076 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 XKR6Q5GH73 641 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 MANEAQ5SRI9 462 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 HIST2H2AA3Q6FI13 130 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 GTF2H2CQ6P1K8 395 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 MFSD9Q8NBP5 474 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 ZNF248Q8NDW4 579 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 UBE2E3Q969T4 207 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.04
HDAC7-224ENST00000488927 LRFN5Q96NI6 719 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 NDC1Q9BTX1 674 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 NT5DC2Q9H857 520 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 ACTR5Q9H9F9 607 aaPredicted RBP15.27■□□□□ 0.04
HDAC7-224ENST00000488927 ASB1Q9Y576 335 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 PCDHGA4Q9Y5G9 962 aa15.27■□□□□ 0.04
HDAC7-224ENST00000488927 ADAMTS20P59510 1910 aa15.27■□□□□ 0.03
HDAC7-224ENST00000488927 ANKRD12Q6UB98 2062 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 PCM1Q15154 2024 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 C1QTNF9BB2RNN3 333 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 ZNF749O43361 778 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 OR1F1O43749 312 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 NRP2O60462 931 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 SIX3O95343 332 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-224ENST00000488927 DLGAP3O95886 979 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 CAPNS1P04632 268 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 RPS17P08708 135 aaKnown RBP15.26■□□□□ 0.03
HDAC7-224ENST00000488927 CCNYL3P0C7X3 344 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 C1QTNF9P0C862 333 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 CPA3P15088 417 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 IMPDH1P20839 514 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 ASPHQ12797 758 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 CHIT1Q13231 466 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 E2F2Q14209 437 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 WASHC2DQ5SRD0 308 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 GARNL3Q5VVW2 1013 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 FRMPD2BQ6IN97 320 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 C6orf15Q6UXA7 325 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-224ENST00000488927 GOLGA7Q7Z5G4 137 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 EXOC3L1Q86VI1 746 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 NLGN4XQ8N0W4 816 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 ESX1Q8N693 406 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 CSNK1A1LQ8N752 337 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 CAMKVQ8NCB2 501 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 TRPV3Q8NET8 790 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 NLGN4YQ8NFZ3 816 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-224ENST00000488927 PPP4R1Q8TF05 950 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 CLIP3Q96DZ5 547 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 DPH2Q9BQC3 489 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-224ENST00000488927 SPRY4Q9C004 299 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 SPRTNQ9H040 489 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-224ENST00000488927 IPPKQ9H8X2 491 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 TMBIM4Q9HC24 238 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 TXLNGQ9NUQ3 528 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 GEMIN8Q9NWZ8 242 aaKnown RBP15.26■□□□□ 0.03
HDAC7-224ENST00000488927 COPG2Q9UBF2 871 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 ZFP69BQ9UJL9 534 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 PCTPQ9UKL6 214 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 STK38LQ9Y2H1 464 aa15.26■□□□□ 0.03
HDAC7-224ENST00000488927 UQCRHLA0A096LP55 91 aa15.25■□□□□ 0.03
HDAC7-224ENST00000488927 LOC105369274A0A096LPK9 316 aa15.25■□□□□ 0.03
HDAC7-224ENST00000488927 LOC102723532A0A0G2JNH3 316 aa15.25■□□□□ 0.03
HDAC7-224ENST00000488927 FEZF1A0PJY2 475 aa15.25■□□□□ 0.03
HDAC7-224ENST00000488927 G3V2L1 256 aa15.25■□□□□ 0.03
HDAC7-224ENST00000488927 TM9SF1O15321 606 aa15.25■□□□□ 0.03
HDAC7-224ENST00000488927 TYROBPO43914 113 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms