RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 LRRC8EQ6NSJ5 796 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 TRMT10BQ6PF06 316 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 AGTRAPQ6RW13 159 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 Q6ZS92 163 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 KIAA0408Q6ZU52 694 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 SYDE1Q6ZW31 735 aaPredicted RBP11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 CNTN4Q8IWV2 1026 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 PDIK1LQ8N165 341 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 MYO1HQ8N1T3 1032 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 GPATCH11Q8N954 259 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 CERS2Q96G23 380 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 PSMG3-AS1Q96PY0 264 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 TRIM31Q9BZY9 425 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 DRC3Q9H069 523 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 TMEM184CQ9NVA4 438 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 CHMP2BQ9UQN3 213 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 SH2B3Q9UQQ2 575 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 COPG1Q9Y678 874 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 CCDC88CQ9P219 2028 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 PRRC2CQ9Y520 2896 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 FEZF1A0PJY2 475 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 SLC16A5O15375 505 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 TTI1O43156 1089 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 SEMA7AO75326 666 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 KLHL18O94889 574 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 TSPAN12O95859 305 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 HIST1H2AGP0C0S8 130 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 HIST1H2ADP20671 130 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 HRH2P25021 359 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 CXCR2P25025 360 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 ITGA8P53708 1063 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 IL2P60568 153 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 CSNK1G2P78368 415 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 PDAP1Q13442 181 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 NR6A1Q15406 480 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 NDUFA9Q16795 377 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 CRB2Q5IJ48 1285 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 HECTD2Q5U5R9 776 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 HIBCHQ6NVY1 386 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 LINC00696Q6ZRV3 163 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 NDUFAF7Q7L592 441 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 VN1R4Q7Z5H5 301 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 ANKMY2Q8IV38 441 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 KBTBD2Q8IY47 623 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 SHISA5Q8N114 240 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 AMER2Q8N7J2 671 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 OR9A4Q8NGU2 314 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 DNAJB14Q8TBM8 379 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 HIST1H2AHQ96KK5 128 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 HIST1H2AJQ99878 128 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 WDR77Q9BQA1 342 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 WDR83Q9BRX9 315 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 H2AFJQ9BTM1 129 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 SLC29A3Q9BZD2 475 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 PCBD2Q9H0N5 130 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 LRRC4CQ9HCJ2 640 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 VWA7Q9Y334 891 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 SAR1BQ9Y6B6 198 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 TEX264Q9Y6I9 313 aa11.33□□□□□ -0.6
CCHCR1-215ENST00000488920 LRRK2Q5S007 2527 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 KCNE1BA0A087WTH5 132 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 NSG1A0A0A6YYJ2 146 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 LCMT2O60294 686 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 JRKO75564 520 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 CBX6O95503 412 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 COX6A1P12074 109 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 CDH1P12830 882 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 GP1BBP13224 206 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 NPPBP16860 134 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 BCL6P41182 706 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 AVPR1BP47901 424 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 ARL4CP56559 192 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 RPS15AP62244 130 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 EEF1A2Q05639 463 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 SP140Q13342 867 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 FAM53BQ14153 422 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 ZXDCQ2QGD7 858 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 IGFL2Q6UWQ7 119 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 ISLR2Q6UXK2 745 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 PRSS41Q7RTY9 318 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 GALNT7Q86SF2 657 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 C17orf64Q86WR6 236 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 ZC3H7AQ8IWR0 971 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 CATSPER1Q8NEC5 780 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 PYCR2Q96C36 320 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 CNDP1Q96KN2 507 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 RUNDC3BQ96NL0 473 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 NAPGQ99747 312 aaPredicted RBP11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 OLFM1Q99784 485 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 SGPP1Q9BX95 441 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 TGIF2Q9GZN2 237 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 C14orf105Q9NVL8 296 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 ARL15Q9NXU5 204 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 MKL2Q9ULH7 1088 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 PYCARDQ9ULZ3 195 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms