RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CNTNAP3Q9BZ76 1288 aa12.26□□□□□ -0.45
NELFE-209ENST00000488426 BRF2Q9HAW0 419 aa12.26□□□□□ -0.45
NELFE-209ENST00000488426 TRNAU1APQ9NX07 287 aaKnown RBP12.26□□□□□ -0.45
NELFE-209ENST00000488426 PCOLCE2Q9UKZ9 415 aa12.26□□□□□ -0.45
NELFE-209ENST00000488426 TMED5Q9Y3A6 229 aa12.26□□□□□ -0.45
NELFE-209ENST00000488426 PLEKHM1Q9Y4G2 1056 aa12.26□□□□□ -0.45
NELFE-209ENST00000488426 DGKBQ9Y6T7 804 aa12.26□□□□□ -0.45
NELFE-209ENST00000488426 ZFHX4Q86UP3 3567 aa12.26□□□□□ -0.45
NELFE-209ENST00000488426 A0A088AWK7 358 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 A0A1B0GTW7 788 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 A0A1B0GVT2 93 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 A0A1W2PPC4 97 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 NR5A2O00482 541 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 FBP2O00757 339 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 BCAT2O15382 392 aaPredicted RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 KDM1AO60341 852 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 SEC22BO75396 215 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 CIB2O75838 187 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 SPINK2P20155 84 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 KCNK10P57789 538 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 TBL3Q12788 808 aaKnown RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 TSTA3Q13630 321 aaPredicted RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 CLCA4Q14CN2 919 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 ALG11Q2TAA5 492 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 THEMIS2Q5TEJ8 643 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 CACHD1Q5VU97 1274 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 DUS1LQ6P1R4 473 aaKnown RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 MED27Q6P2C8 311 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 CYP20A1Q6UW02 462 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 NXPE4Q6UWF7 544 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 SUSD1Q6UWL2 747 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 FAM9CQ8IZT9 166 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 PCYOX1LQ8NBM8 494 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 OR13H1Q8NG92 308 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 MTFMTQ96DP5 389 aaKnown RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 IL17FQ96PD4 163 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 NPAS2Q99743 824 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 GPR27Q9NS67 375 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 IMP3Q9NV31 184 aaKnown RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 PLAGL1Q9UM63 463 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 NDUFAF1Q9Y375 327 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 POLR3HQ9Y535 204 aaPredicted RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 SPAARA0A1B0GVQ0 90 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 FAM234BA2RU67 622 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 A8MUI8 341 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 MRASO14807 208 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 G6PDP11413 515 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 MTHFD1P11586 935 aaKnown RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 JAK1P23458 1154 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 NDUFS1P28331 727 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 MAPK1P28482 360 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 RAB28P51157 221 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 NEK2P51955 445 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 ATXN3P54252 364 aaPredicted RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 NME5P56597 212 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 KRT33BQ14525 404 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 RPE65Q16518 533 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 PGM2L1Q6PCE3 622 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 LAS2Q8IYD9 372 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 OR7G3Q8NG95 312 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 UBE2E3Q969T4 207 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 TSACCQ96A04 125 aaPredicted RBP12.25□□□□□ -0.45
NELFE-209ENST00000488426 ROPN1LQ96C74 230 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 SERPINI1Q99574 410 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 WDR41Q9HAD4 459 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 TM9SF3Q9HD45 589 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 PRDM8Q9NQV8 689 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 TSC22D4Q9Y3Q8 395 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 COLEC10Q9Y6Z7 277 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 CFAP47Q6ZTR5 3102 aa12.25□□□□□ -0.45
NELFE-209ENST00000488426 PCM1Q15154 2024 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 A0A1W2PP18 115 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 ANKRD28O15084 1053 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 ANGPT2O15123 496 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 SH3BP5O60239 455 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 RASGRP1O95267 797 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 ATP6V1G2O95670 118 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 WNT1P04628 370 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 PRPS2P11908 318 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 GNSP15586 552 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 CAPN3P20807 821 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 VARSP26640 1264 aaKnown RBP12.24□□□□□ -0.45
NELFE-209ENST00000488426 PKLRP30613 574 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 POLR2JP52435 117 aaKnown RBP12.24□□□□□ -0.45
NELFE-209ENST00000488426 UFM1P61960 85 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 SLBPQ14493 270 aaKnown RBP eCLIP12.24□□□□□ -0.45
NELFE-209ENST00000488426 KIAA0040Q15053 153 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 HIST2H2ACQ16777 129 aaPredicted RBP12.24□□□□□ -0.45
NELFE-209ENST00000488426 TRMT5Q32P41 509 aaKnown RBP12.24□□□□□ -0.45
NELFE-209ENST00000488426 C6orf163Q5TEZ5 329 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 HIST2H2AA3Q6FI13 130 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 BNC2Q6ZN30 1099 aaPredicted RBP12.24□□□□□ -0.45
NELFE-209ENST00000488426 NET1Q7Z628 596 aaPredicted RBP12.24□□□□□ -0.45
NELFE-209ENST00000488426 C17orf64Q86WR6 236 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 OR2L8Q8NGY9 312 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 RNF217Q8TC41 542 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 PROKR1Q8TCW9 393 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 SPDL1Q96EA4 605 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms