RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SH3KBP1Q96B97 665 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 TESCQ96BS2 214 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 LRRC58Q96CX6 371 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 KLHDC7BQ96G42 594 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 ZBTB18Q99592 522 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 PITHD1Q9GZP4 211 aaPredicted RBP9.08□□□□□ -0.96
SF3B1-211ENST00000487698 RHBGQ9H310 441 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 NT5DC2Q9H857 520 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 GID8Q9NWU2 228 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 CD300AQ9UGN4 299 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 SPAG17Q6Q759 2223 aa9.08□□□□□ -0.96
SF3B1-211ENST00000487698 A0A1W2PR77 199 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 TRIM38O00635 465 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 NME4O00746 187 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 MAP3K7O43318 606 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 NDUFS2O75306 463 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PSMG1O95456 288 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 TBX6O95947 436 aaPredicted RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 NPPAP01160 153 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 WNT1P04628 370 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 IL6P05231 212 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 XRCC1P18887 633 aaPredicted RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 ME2P23368 584 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SHMT2P34897 504 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SLC19A1P41440 591 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CCR8P51685 355 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SLC7A2P52569 658 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CLNS1AP54105 237 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 NFYCQ13952 458 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CCNIQ14094 377 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 FAM174BQ3ZCQ3 159 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SPANXN4Q5MJ08 99 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SLC2A7Q6PXP3 512 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 DLEU7Q6UYE1 221 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PARGQ86W56 976 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 DCP2Q8IU60 420 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 KIAA2013Q8IYS2 634 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PHACTR4Q8IZ21 702 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 C1orf52Q8N6N3 182 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 MFSD2AQ8NA29 543 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SLC13A3Q8WWT9 602 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 EGLN2Q96KS0 407 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 TSSK3Q96PN8 268 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 AIF1LQ9BQI0 150 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 IER2Q9BTL4 223 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 EBPLQ9BY08 206 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 GSDMCQ9BYG8 508 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 DCLRE1BQ9H816 532 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 AASDHPPTQ9NRN7 309 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 ADA2Q9NZK5 511 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 OR6C2Q9NZP2 312 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SUCOQ9UBS9 1254 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 NKX1-2Q9UD57 310 aaPredicted RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 ADGRE2Q9UHX3 823 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 MUTYHQ9UIF7 546 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SIT1Q9Y3P8 196 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 NEUROG3Q9Y4Z2 214 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 GOLGA4Q13439 2230 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PRORSD1PA6NEY8 169 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 ACOT8O14734 319 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PRMT3O60678 531 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 KRT36O76013 467 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 LMNAP02545 664 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PGRP06401 933 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 DCNP07585 359 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CXCR2P25025 360 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SERPINB1P30740 379 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 TIA1P31483 386 aaKnown RBP eCLIP9.07□□□□□ -0.962e-10■■■■■ 34.9
SF3B1-211ENST00000487698 CXCL12P48061 93 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CSNK1G2P78368 415 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PHEXP78562 749 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 ABATP80404 500 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CAPRIN1Q14444 709 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SAMD4BQ5PRF9 694 aaKnown RBP9.07□□□□□ -0.96
SF3B1-211ENST00000487698 IYDQ6PHW0 289 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 MAMSTRQ6ZN01 415 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PRR23BQ6ZRT6 265 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 ARMCX6Q7L4S7 300 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 IQCHQ86VS3 1027 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SLC15A3Q8IY34 581 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 RNF148Q8N7C7 305 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 ANKRD53Q8N9V6 530 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 C1orf216Q8TAB5 229 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 JADE3Q92613 823 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 TMEM125Q96AQ2 219 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CXorf40BQ96DE9 158 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 IL1RL2Q9HB29 575 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SLC6A20Q9NP91 592 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 CMTM6Q9NX76 183 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SPHK1Q9NYA1 384 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 SLAMF8Q9P0V8 285 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 DLGAP2Q9P1A6 1054 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 TAAR2Q9P1P5 351 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 INVSQ9Y283 1065 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 PCDHA9Q9Y5H5 950 aa9.07□□□□□ -0.96
SF3B1-211ENST00000487698 THADAQ6YHU6 1953 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 TNRC6BQ9UPQ9 1833 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms