RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CCDC91Q7Z6B0 441 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 RTN4RL2Q86UN3 420 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 EID3Q8N140 333 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 RYBPQ8N488 228 aaPredicted RBP4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF713Q8N859 430 aaPredicted RBP4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 UXS1Q8NBZ7 420 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 FIBINQ8TAL6 211 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 RHNO1Q9BSD3 238 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 URM1Q9BTM9 101 aaKnown RBP4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 SDR39U1Q9NRG7 319 aaPredicted RBP4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ZFP57Q9NU63 452 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ITGA11Q9UKX5 1188 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 CDH7Q9ULB5 785 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 NRXN1Q9ULB1 1477 aa4.56□□□□□ -1.68
PRPF38A-203ENST00000487160 ITSN1Q15811 1721 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 IGSF1Q8N6C5 1336 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 LRRC37A3O60309 1634 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 IGLV9-49A0A0B4J1Y8 123 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 TRAV24A0A0B4J272 114 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 LOC101059948A0A1B0GTJ6 334 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 A0A1W2PN81 502 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 OOEPA6NGQ2 149 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 ARPC2O15144 300 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 FMO6PO60774 539 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 FCGR3BO75015 233 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 CRYAAP02489 173 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 F7P08709 466 aaPredicted RBP4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 SOAT1P35610 550 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 CHRNA7P36544 502 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 RASGEF1BQ0VAM2 473 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 NONOQ15233 471 aaKnown RBP eCLIP4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 TYSND1Q2T9J0 566 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 TECRLQ5HYJ1 363 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 TXNRD3NBQ6F5E7 133 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 WBP2NLQ6ICG8 309 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF449Q6P9G9 518 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 IYDQ6PHW0 289 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 LINC00696Q6ZRV3 163 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 SYCP3Q8IZU3 236 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 APCDD1Q8J025 514 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 RFLNBQ8N5W9 214 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 GPATCH11Q8N954 259 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 RASGEF1AQ8N9B8 481 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 LMNTD1Q8N9Z9 388 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 CTCFLQ8NI51 663 aaPredicted RBP4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 PHLDA1Q8WV24 401 aaPredicted RBP4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 RIT1Q92963 219 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 NSL1Q96IY1 281 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF354BQ96LW1 612 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 CCDC3Q9BQI4 270 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 FUT8Q9BYC5 575 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 DNAI2Q9GZS0 605 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 MMADHCQ9H3L0 296 aaPredicted RBP4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 TLE6Q9H808 572 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 ECHDC1Q9NTX5 307 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 FAM118AQ9NWS6 357 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 ACAD8Q9UKU7 415 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 DLC1Q96QB1 1528 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 SMCHD1A6NHR9 2005 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 TECPR2O15040 1411 aa4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 RRBP1Q9P2E9 1410 aaKnown RBP4.55□□□□□ -1.68
PRPF38A-203ENST00000487160 ARHGEF10O15013 1369 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 PLEKHH1Q9ULM0 1364 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 A0A0U1RQG5 324 aaPredicted RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 PPIP5K2O43314 1243 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 SNX3O60493 162 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 TSHBP01222 138 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 IGHV4-38-2P0DP08 117 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 VDRP11473 427 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 LIFP15018 202 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 EFNA1P20827 205 aaPredicted RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 CDH3P22223 829 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 DCTP40126 519 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 NKX2-1P43699 371 aaPredicted RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 ALDH3A2P51648 485 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 POU3F1Q03052 451 aaPredicted RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 ILF2Q12905 390 aaKnown RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 PHKG1Q16816 387 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF674Q2M3X9 581 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 ACCSLQ4AC99 568 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 NOTUMQ6P988 496 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 CYB5D1Q6P9G0 228 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 GDPD4Q6W3E5 623 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 C15orf39Q6ZRI6 1047 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 TUSC5Q8IXB3 177 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 ZNF843Q8N446 348 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 GRK7Q8WTQ7 553 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 PTP4A1Q93096 173 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 UTP14AQ9BVJ6 771 aaKnown RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 BICC1Q9H694 974 aaKnown RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 TRPV4Q9HBA0 871 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 CWC25Q9NXE8 425 aaPredicted RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 STUB1Q9UNE7 303 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 LIPT1Q9Y234 373 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 TOPAZ1Q8N9V7 1692 aa4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 GOLGB1Q14789 3259 aaKnown RBP4.54□□□□□ -1.68
PRPF38A-203ENST00000487160 SBNO1A3KN83 1393 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 ROCK1Q13464 1354 aa4.53□□□□□ -1.68
PRPF38A-203ENST00000487160 YDJCA8MPS7 323 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms