RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 KRT78Q8N1N4 520 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 NEIL2Q969S2 332 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 FKBP10Q96AY3 582 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 SCYL1Q96KG9 808 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 CATSPER2Q96P56 530 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 OR2A5Q96R48 311 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 OR4K3Q96R72 315 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 MRPL46Q9H2W6 279 aaKnown RBP14□□□□□ -0.17
LIMS3-205ENST00000487150 CUTCQ9NTM9 273 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 OPTCQ9UBM4 332 aa14□□□□□ -0.17
LIMS3-205ENST00000487150 GPN3Q9UHW5 284 aaPredicted RBP14□□□□□ -0.17
LIMS3-205ENST00000487150 NXT1Q9UKK6 140 aaKnown RBP14□□□□□ -0.17
LIMS3-205ENST00000487150 KIF26BQ2KJY2 2108 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 URADA6NGE7 173 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 H0YGG7 62 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 K7EPI3 171 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 EIF2S1P05198 315 aaKnown RBP13.99□□□□□ -0.17
LIMS3-205ENST00000487150 LIFP15018 202 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 TCN2P20062 427 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 TAC1P20366 129 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 ITPKBP27987 946 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 GCAP28676 217 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 AHRP35869 848 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 GLRBP48167 497 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 ARF3P61204 181 aaPredicted RBP13.99□□□□□ -0.17
LIMS3-205ENST00000487150 REEP5Q00765 189 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 RGS1Q08116 209 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 GPS2Q13227 327 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 LAPTM5Q13571 262 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 DNASE1L3Q13609 305 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 NAA30Q147X3 362 aaPredicted RBP13.99□□□□□ -0.17
LIMS3-205ENST00000487150 PRTGQ2VWP7 1150 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 TECRLQ5HYJ1 363 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 NXPE4Q6UWF7 544 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 GPR155Q7Z3F1 870 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 CROCCP2Q86T23 111 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 VASH2Q86V25 355 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 SNX31Q8N9S9 440 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 OR4K1Q8NGD4 311 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 CT55Q8WUE5 264 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
LIMS3-205ENST00000487150 STARD8Q92502 1023 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 UBE2E3Q969T4 207 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 TMEM79Q9BSE2 394 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 EFCAB11Q9BUY7 163 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 CD244Q9BZW8 370 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 ROPN1BQ9BZX4 212 aaPredicted RBP13.99□□□□□ -0.17
LIMS3-205ENST00000487150 SPRTNQ9H040 489 aaPredicted RBP13.99□□□□□ -0.17
LIMS3-205ENST00000487150 ROPN1Q9HAT0 212 aaPredicted RBP13.99□□□□□ -0.17
LIMS3-205ENST00000487150 XPR1Q9UBH6 696 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 NDOR1Q9UHB4 597 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 ANGPTL3Q9Y5C1 460 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 PCDHGA4Q9Y5G9 962 aa13.99□□□□□ -0.17
LIMS3-205ENST00000487150 URB1O60287 2271 aaKnown RBP13.98□□□□□ -0.17
LIMS3-205ENST00000487150 MAP1BP46821 2468 aaKnown RBP13.98□□□□□ -0.17
LIMS3-205ENST00000487150 TEX51A0A1B0GUA7 166 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 HYKKA2RU49 373 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 STX16-NPEPL1H3BU86 382 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 UBXN8O00124 270 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 STX16O14662 325 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 KLK8O60259 260 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 CCNT2O60583 730 aaKnown RBP13.98□□□□□ -0.17
LIMS3-205ENST00000487150 GLRA3O75311 464 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 RFPL1O75677 317 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 SERPINB1P30740 379 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 HSPA7P48741 367 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 CXADRP78310 365 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 PWP1Q13610 501 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 FAM53BQ14153 422 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 SETDB1Q15047 1291 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 NCF4Q15080 339 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 NKAIN1Q4KMZ8 207 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 ATG9BQ674R7 924 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 FRMPD2BQ6IN97 320 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 FBXO42Q6P3S6 717 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 TTLL10Q6ZVT0 673 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 SYVN1Q86TM6 617 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 ASPGQ86U10 573 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 MFSD9Q8NBP5 474 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 TRPV3Q8NET8 790 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 GPR78Q96P69 363 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 GBP5Q96PP8 586 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 DRC3Q9H069 523 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 CHST8Q9H2A9 424 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 IFT80Q9P2H3 777 aaPredicted RBP13.98□□□□□ -0.17
LIMS3-205ENST00000487150 TBK1Q9UHD2 729 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 ADAMTS20P59510 1910 aa13.98□□□□□ -0.17
LIMS3-205ENST00000487150 LOC105369274A0A096LPK9 316 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 LOC102723532A0A0G2JNH3 316 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 LOC101059948A0A1B0GTJ6 334 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 EFSO43281 561 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 HCRTR1O43613 425 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 OR1F1O43749 312 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 ALBP02768 609 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 SHBGP04278 402 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 C1GALT1C1LP0DN25 315 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 EPB42P16452 691 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 ITGAXP20702 1163 aa13.97□□□□□ -0.17
LIMS3-205ENST00000487150 ALAS2P22557 587 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms