RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SH2D5Q6ZV89 423 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 KIRREL3Q8IZU9 778 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 KLHDC1Q8N7A1 406 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 CCDC63Q8NA47 563 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 HPSE2Q8WWQ2 592 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 PTP4A1Q93096 173 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 SGF29Q96ES7 293 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 GIMAP5Q96F15 307 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 C4orf45Q96LM5 186 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 PGLYRP2Q96PD5 576 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 NDNQ99608 321 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 PITPNM3Q9BZ71 974 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 LSG1Q9H089 658 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 MMADHCQ9H3L0 296 aaPredicted RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 SLC52A3Q9NQ40 469 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 PPANQ9NQ55 473 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 DNAJC17Q9NVM6 304 aaKnown RBP3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 SLCO1C1Q9NYB5 712 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 TCF19Q9Y242 345 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 C2CD2Q9Y426 696 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 R4GN57 208 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 IL16Q14005 1332 aa3.16□□□□□ -1.9
SNRNP27-204ENST00000487029 GREB1LQ9C091 1923 aaPredicted RBP3.15□□□□□ -1.9
SNRNP27-204ENST00000487029 TRBV5-5A0A0J9YX44 114 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 PRSS46E5RG02 174 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 CCL24O00175 119 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 KLF11O14901 512 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 EPHB6O15197 1021 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 NADKO95544 446 aaPredicted RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 EML2O95834 649 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 GPIP06744 558 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 CFC1P0CG37 223 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 VDRP11473 427 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 ITIH1P19827 911 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 SFTPDP35247 375 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 CETN2P41208 172 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 FRKP42685 505 aaPredicted RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 MAGEA11P43364 429 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 IER3P46695 156 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 NPBWR1P48145 328 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 SNU13P55769 128 aaKnown RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 ST8SIA6P61647 398 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 ASIC1P78348 528 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 MYL7Q01449 175 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 FOLH1Q04609 750 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 OPCMLQ14982 345 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 MORF4L2Q15014 288 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 SMU1Q2TAY7 513 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 KBTBD12Q3ZCT8 623 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 GPR33Q49SQ1 333 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 GTDC1Q4AE62 458 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 C14orf177Q52M58 125 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 FAM46CQ5VWP2 391 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 TTC27Q6P3X3 843 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 FUT10Q6P4F1 479 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 PRSS55Q6UWB4 352 aaPredicted RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 NHLRC1Q6VVB1 395 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 GPR141Q7Z602 305 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 PIGWQ7Z7B1 504 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 SNX32Q86XE0 403 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 MEX3DQ86XN8 651 aaKnown RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 CREBRFQ8IUR6 639 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 RCOR2Q8IZ40 523 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 AMER3Q8N944 861 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 OR2T11Q8NH01 316 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 OR4C3Q8NH37 302 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 METTL21AQ8WXB1 218 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 SUSD6Q92537 303 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 PIK3R3Q92569 461 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 DYRK2Q92630 601 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 CENPTQ96BT3 561 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 HNRNPABQ99729 332 aaKnown RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF350Q9GZX5 532 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 FAM49AQ9H0Q0 323 aaPredicted RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 RIMS4Q9H426 269 aaPredicted RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 SRD5A3Q9H8P0 318 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 IL1RAPL2Q9NP60 686 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 PHPT1Q9NRX4 125 aaPredicted RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 OR6C2Q9NZP2 312 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 PA2G4Q9UQ80 394 aaKnown RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 RUVBL2Q9Y230 463 aaKnown RBP3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 KLK4Q9Y5K2 254 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 STK36Q9NRP7 1315 aa3.15□□□□□ -1.91
SNRNP27-204ENST00000487029 A0A0B4J203 849 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 ILVBLA1L0T0 632 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 CTDSPLO15194 276 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 ZG16O60844 167 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 TRMUO75648 421 aaKnown RBP3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 KRT33AO76009 404 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC16A8O95907 504 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 GH1P01241 217 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 ATP1B1P05026 303 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 FAM157CP0CG43 387 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 PRSS56P0CW18 603 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 F3P13726 295 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 PIK3R1P27986 724 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 ALDH1B1P30837 517 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 CDKN1AP38936 164 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms