RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 DNAJC11Q9NVH1 559 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 INTS7Q9NVH2 962 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 IRAK4Q9NWZ3 460 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 NKIRAS1Q9NYS0 192 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 OR6C2Q9NZP2 312 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 OPTCQ9UBM4 332 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MID2Q9UJV3 735 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 WASF3Q9UPY6 502 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 PLLPQ9Y342 182 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 ASB1Q9Y576 335 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 UNC13CQ8NB66 2214 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 ZFHX4Q86UP3 3567 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 IGHV5-51A0A0C4DH38 117 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 A0A0J9YY10 115 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 A0A1W2PPV9 198 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 PMS2P1A4D2B8 440 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 FAM221BA6H8Z2 402 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 EFCAB7A8K855 629 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 HMGB1P1B2RPK0 211 aaPredicted RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 B8ZZF3 427 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 D6RAR5 112 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 E7EQ34 232 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 G3V2L1 256 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 H7BY64 318 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 K7EPI3 171 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 NTN3O00634 580 aaPredicted RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 TYROBPO43914 113 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 NRP2O60462 931 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CSO75390 466 aaKnown RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 CCNDBP1O95273 360 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 STATHP02808 62 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 SERPIND1P05546 499 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 GP1BAP07359 652 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 HGFP14210 728 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ST6GAL1P15907 406 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 MAGP20916 626 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 SDHBP21912 280 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ALDH3A1P30838 453 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CCR10P46092 362 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 LSSP48449 732 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 HNMTP50135 292 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ATP1A2P50993 1020 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 MAPK10P53779 464 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 NAGLUP54802 743 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ALDH18A1P54886 795 aaKnown RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 INHBCP55103 352 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 FOXM1Q08050 763 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CYP4F3Q08477 520 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CDC16Q13042 620 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 GTF2H2Q13888 395 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 PUM1Q14671 1186 aaKnown RBP eCLIP5.41□□□□□ -1.54
COPS3-208ENST00000486032 KCNAB1Q14722 419 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 NR1D2Q14995 579 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ARHGAP19Q14CB8 494 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 RBBP5Q15291 538 aaKnown RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 PDK4Q16654 411 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ZXDCQ2QGD7 858 aaPredicted RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 DEFB110Q30KQ9 67 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 TNFAIP8L3Q5GJ75 292 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CATSPEREQ5SY80 951 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 KIAA1614Q5VZ46 1190 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 FAM219BQ5XKK7 198 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ICE2Q659A1 982 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 GTF2H2CQ6P1K8 395 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 FIGLAQ6QHK4 219 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 LCTLQ6UWM7 567 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ZYG11AQ6WRX3 759 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 ZNF574Q6ZN55 896 aaPredicted RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 ZCCHC23Q6ZST2 131 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 DGLUCYQ7Z3D6 616 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 GOLGA7Q7Z5G4 137 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 GLRX5Q86SX6 157 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 LCA5Q86VQ0 697 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 C17orf64Q86WR6 236 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 PLD3Q8IV08 490 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 RASGRP3Q8IV61 690 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 NUDCD3Q8IVD9 361 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 C10orf107Q8IVU9 208 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 LRRC56Q8IYG6 542 aaPredicted RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 CNPY4Q8N129 248 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CHCHD4Q8N4Q1 142 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 OR2L3Q8NG85 312 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 OR2A1Q8NGT9 310 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 OR56A3Q8NH54 315 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 MDM1Q8TC05 714 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 TRPC4APQ8TEL6 797 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 DYDC1Q8WWB3 177 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 SLC5A11Q8WWX8 675 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 PRAP1Q96NZ9 151 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 NSUN5Q96P11 429 aaKnown RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 FCRL4Q96PJ5 515 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 TMEM237Q96Q45 408 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 OR4K3Q96R72 315 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 SH3GL2Q99962 352 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 HAUS8Q9BT25 410 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 DPH7Q9BTV6 452 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CD244Q9BZW8 370 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 EPB41L1Q9H4G0 881 aa5.41□□□□□ -1.54
COPS3-208ENST00000486032 CNOT10Q9H9A5 744 aaKnown RBP5.41□□□□□ -1.54
COPS3-208ENST00000486032 SLC6A20Q9NP91 592 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms