RNA–Protein interactions for RNA: ENST00000485943.1

USP40-216, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-216ENST00000485943 RBBP5Q15291 538 aaKnown RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 TRADDQ15628 312 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 CCSMST1Q4G0I0 132 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 ZNF658BQ4V348 819 aaPredicted RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 PAGE2BQ5JRK9 111 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 WASHC2DQ5SRD0 308 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 YOD1Q5VVQ6 348 aaPredicted RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 KIAA1614Q5VZ46 1190 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 PWWP2BQ6NUJ5 590 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 LCTLQ6UWM7 567 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 TMPRSS11BQ86T26 416 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 RAB43Q86YS6 212 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 FAM20CQ8IXL6 584 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 LMNTD1Q8N9Z9 388 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 CAMKVQ8NCB2 501 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 OR1L3Q8NH93 324 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 PROKR1Q8TCW9 393 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 ZNF480Q8WV37 535 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 SREK1Q8WXA9 508 aaKnown RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 STARD8Q92502 1023 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 ANKRD7Q92527 254 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 NKD1Q969G9 470 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 PYCR2Q96C36 320 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 MTBPQ96DY7 904 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 FAR2Q96K12 515 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 PRAP1Q96NZ9 151 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 RUFY1Q96T51 708 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 OLFM1Q99784 485 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 GPR87Q9BY21 358 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 PITPNM3Q9BZ71 974 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 DERL2Q9GZP9 239 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 ALG9Q9H6U8 611 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 BRD7Q9NPI1 651 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 SNX15Q9NRS6 342 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 ZDHHC18Q9NUE0 388 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 TMEM184CQ9NVA4 438 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 CUEDC1Q9NWM3 386 aaPredicted RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 SIDT1Q9NXL6 827 aaKnown RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 CPSF2Q9P2I0 782 aaKnown RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 PSMC3IPQ9P2W1 217 aaPredicted RBP7.71□□□□□ -1.18
USP40-216ENST00000485943 ACSL6Q9UKU0 697 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 OARD1Q9Y530 152 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 ACACBO00763 2458 aa7.71□□□□□ -1.18
USP40-216ENST00000485943 SDK2Q58EX2 2172 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 A0A096LPK6 155 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 A0A1B0GX78 115 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 TLDC2A0PJX2 215 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 HYKKA2RU49 373 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 KRT87PA6NCN2 255 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 PSMD12O00232 456 aaPredicted RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 OR1F1O43749 312 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 FAM155BO75949 473 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 IPO13O94829 963 aaKnown RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 TUBBP07437 444 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 RBP1P09455 135 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 MYZAPP0CAP1 466 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 FAM157BP0CG42 384 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 LIFP15018 202 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 GNAZP19086 355 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 FBLP22087 321 aaKnown RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 IMPA1P29218 277 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 STAT5AP42229 794 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 CCR10P46092 362 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 GLRBP48167 497 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 TGM3Q08188 693 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 GBX1Q14549 363 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 SLC9A5Q14940 896 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 TSNQ15631 228 aaKnown RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 PTCHD3Q3KNS1 767 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 TTC19Q6DKK2 380 aaPredicted RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 SULT1C3Q6IMI6 304 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 MBOAT1Q6ZNC8 495 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 CMC1Q7Z7K0 106 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 GSPT2Q8IYD1 628 aaKnown RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 SPATA6LQ8N4H0 392 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 CSNK1A1LQ8N752 337 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 BMPERQ8N8U9 685 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 LINC01555Q8NAE3 123 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 TTLQ8NG68 377 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 HMGCLL1Q8TB92 370 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 SLC5A11Q8WWX8 675 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 FBXL8Q96CD0 374 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 ZNF501Q96CX3 271 aaPredicted RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 MMABQ96EY8 250 aaPredicted RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 PDLIM5Q96HC4 596 aaKnown RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 PLCD4Q9BRC7 762 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 SPRTNQ9H040 489 aaPredicted RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 DRC3Q9H069 523 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 COPS7BQ9H9Q2 264 aaPredicted RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 PPCSQ9HAB8 311 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 ACSS2Q9NR19 701 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 STARD5Q9NSY2 213 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 CUTCQ9NTM9 273 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 NUDT4Q9NZJ9 180 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 OPTCQ9UBM4 332 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 DHCR7Q9UBM7 475 aaKnown RBP7.7□□□□□ -1.18
USP40-216ENST00000485943 TBK1Q9UHD2 729 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 PILRAQ9UKJ1 303 aa7.7□□□□□ -1.18
USP40-216ENST00000485943 ADAMTS6Q9UKP5 1117 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms