RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 OR2A5Q96R48 311 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 OR4K3Q96R72 315 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PKP4Q99569 1192 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 GPR22Q99680 433 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 DPH2Q9BQC3 489 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 SGPP1Q9BX95 441 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 GPR87Q9BY21 358 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 TXLNGYQ9BZA5 131 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 UNKQ9C0B0 810 aaKnown RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 RAB17Q9H0T7 212 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 SLC26A1Q9H2B4 701 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CAB39LQ9H9S4 337 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PARVBQ9HBI1 364 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 LHX9Q9NQ69 397 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PCMTD2Q9NV79 361 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 NSMCE4AQ9NXX6 385 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 EURLQ9NYK6 297 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 FRRS1LQ9P0K9 344 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 STOX2Q9P2F5 926 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 ANKMY1Q9P2S6 941 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 COPG2Q9UBF2 871 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 RARRES3Q9UL19 164 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PADI1Q9ULC6 663 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PDE10AQ9Y233 779 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 UTP11Q9Y3A2 253 aaKnown RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 DNAJC13O75165 2243 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PCNX1Q96RV3 2341 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PCNX3Q9H6A9 2034 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 IGLV3-12A0A075B6K2 115 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 NBPF19A0A087WUL8 3843 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 A0A1W2PQ72 361 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 GSAPA4D1B5 854 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FOXO6A8MYZ6 492 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 E5RI56 91 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 M0R082 166 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 ZBTB14O43829 449 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 SRPX2O60687 465 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 DNAJB6O75190 326 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 VPS26AO75436 327 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 URI1O94763 535 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 KIAA0754O94854 1291 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 STATHP02808 62 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 CATP04040 527 aaKnown RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 C8GP07360 202 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 ENO2P09104 434 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 FAM153BP0C7A2 387 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 EPORP19235 508 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 MAGP20916 626 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 GGT5P36269 586 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 SLC26A3P40879 764 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 MAGEA12P43365 314 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 KCNC1P48547 511 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PNLIPRP1P54315 467 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 ITGA1P56199 1179 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 AP1S2P56377 157 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 POU4F1Q01851 419 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FOXM1Q08050 763 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 KRT33BQ14525 404 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PRTGQ2VWP7 1150 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FAM153CQ494X1 144 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FBXO48Q5FWF7 155 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 CDKL4Q5MAI5 379 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 TMTC4Q5T4D3 741 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 YOD1Q5VVQ6 348 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 BROXQ5VW32 411 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 CPZQ66K79 652 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FRMPD2BQ6IN97 320 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FAM45BPQ6NSW5 357 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 TLDC1Q6P9B6 456 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 C3orf62Q6ZUJ4 267 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 MED25Q71SY5 747 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PRSS41Q7RTY9 318 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 APLFQ8IW19 511 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 EIF1ADQ8N9N8 165 aaKnown RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 OR56A3Q8NH54 315 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 KIF18AQ8NI77 898 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 ZNF417Q8TAU3 575 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FAM45AQ8TCE6 357 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PYROXD1Q8WU10 500 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 SMPDL3AQ92484 453 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 NACC2Q96BF6 587 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PTERQ96BW5 349 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FBXL8Q96CD0 374 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 TM4SF19Q96DZ7 209 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 CFAP36Q96G28 342 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 VPS39Q96JC1 886 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 C10orf90Q96M02 699 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 FOPNLQ96NB1 174 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 UBL7Q96S82 380 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 ZNF587Q96SQ5 575 aaPredicted RBP5.47□□□□□ -1.53
CUX1-208ENST00000485792 RBBP8Q99708 897 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 CPNE1Q99829 537 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 PLCD4Q9BRC7 762 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 TMEM79Q9BSE2 394 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 EFHD1Q9BUP0 239 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 NLNQ9BYT8 704 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 ULBP3Q9BZM4 244 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 DERL2Q9GZP9 239 aa5.47□□□□□ -1.53
CUX1-208ENST00000485792 SPRTNQ9H040 489 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms