RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 COX6B1P14854 86 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 NPY2RP49146 381 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 EFNA3P52797 238 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 CASP6P55212 293 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ABATP80404 500 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 EEF1A2Q05639 463 aaKnown RBP12.33□□□□□ -0.44
HDAC6-227ENST00000485102 TYSND1Q2T9J0 566 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 HKDC1Q2TB90 917 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.33□□□□□ -0.44
HDAC6-227ENST00000485102 RNF187Q5TA31 235 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-227ENST00000485102 MEI1Q5TIA1 1274 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ARMC3Q5W041 872 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ICE2Q659A1 982 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 PLAG1Q6DJT9 500 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 C4orf22Q6V702 233 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 Q6ZPB1 254 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-227ENST00000485102 NEK10Q6ZWH5 1172 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 PCGF5Q86SE9 256 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ZNF295-AS1Q8N0V1 137 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ATG4AQ8WYN0 398 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 LPGAT1Q92604 370 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 PBKQ96KB5 322 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 KIFC1Q9BW19 673 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ACAT2Q9BWD1 397 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 FAM114A2Q9NRY5 505 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 KLHL42Q9P2K6 505 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 MKL2Q9ULH7 1088 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ZNF148Q9UQR1 794 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ZKSCAN5Q9Y2L8 839 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 CAPN6Q9Y6Q1 641 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 SPG11Q96JI7 2443 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 KCNE1BA0A087WTH5 132 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 E7ENX8 843 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 PFDN6O15212 129 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 SLC19A2O60779 497 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 MLYCDO95822 493 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 C8orf89P0DMQ9 161 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 TCP1P17987 556 aaKnown RBP12.32□□□□□ -0.44
HDAC6-227ENST00000485102 CAPN3P20807 821 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 ARNTP27540 789 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 RPA3P35244 121 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-227ENST00000485102 SMSP52788 366 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 EIF3BP55884 814 aaKnown RBP12.32□□□□□ -0.44
HDAC6-227ENST00000485102 ADORA2A-AS1P86434 159 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 TAP2Q03519 686 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 NDUFA9Q16795 377 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 MRNIPQ6NTE8 343 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 SDCCAG8Q86SQ7 713 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-227ENST00000485102 ADAMTS18Q8TE60 1221 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 METTL21AQ8WXB1 218 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 RERGQ96A58 199 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-227ENST00000485102 ZNF354BQ96LW1 612 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 CYTH2Q99418 400 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 YIPF2Q9BWQ6 316 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
HDAC6-227ENST00000485102 BFARQ9NZS9 450 aa12.32□□□□□ -0.44
HDAC6-227ENST00000485102 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
HDAC6-227ENST00000485102 A0A0A6YYC8 382 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 A0A0U1RQJ8 604 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 CTAGE9A4FU28 777 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 ASPDHA6ND91 283 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 I3L1I5 382 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 NSA2O95478 260 aaKnown RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 FTCDO95954 541 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 F10P00742 488 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 CATP04040 527 aaKnown RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 HRH2P25021 359 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 NMBRP28336 390 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 SSTR2P30874 369 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 FMO4P31512 558 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 AVPR1BP47901 424 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 PNLIPRP1P54315 467 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 SESN2P58004 480 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 GNG11P61952 73 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 CDK16Q00536 496 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 ZNF33BQ06732 778 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 KLHL38Q2WGJ6 581 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 ZNF766Q5HY98 468 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 ACER2Q5QJU3 275 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 FAAH2Q6GMR7 532 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 DRICH1Q6PGQ1 229 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 SUSD1Q6UWL2 747 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 CPEB2Q7Z5Q1 589 aaKnown RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 SLC13A5Q86YT5 568 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 SPPL2CQ8IUH8 684 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 LRRC56Q8IYG6 542 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 ACBD4Q8NC06 268 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 MDS2Q8NDY4 140 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 C14orf79Q96F83 325 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 GPR137Q96N19 417 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 EBNA1BP2Q99848 306 aaKnown RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 VN1R1Q9GZP7 353 aa12.31□□□□□ -0.44
HDAC6-227ENST00000485102 C19orf25Q9UFG5 118 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-227ENST00000485102 GFYI3L273 518 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 FFAR3O14843 346 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 GPR42O15529 346 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 NIPSNAP2O75323 286 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms