RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TAP2Q03519 686 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 PRDX1Q06830 199 aaKnown RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 MYBPC3Q14896 1274 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 SLC9A5Q14940 896 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ZKSCAN8Q15776 578 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 CCSMST1Q4G0I0 132 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 TCTE1Q5JU00 501 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 CDKL4Q5MAI5 379 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 DCAF10Q5QP82 559 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 CAPN12Q6ZSI9 719 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 CDHR3Q6ZTQ4 885 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 TRMT10CQ7L0Y3 403 aaKnown RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ADAMTSL2Q86TH1 951 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 CTAGE3PQ8IX95 158 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 DNAJC22Q8N4W6 341 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 OR2L3Q8NG85 312 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF480Q8WV37 535 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 TM9SF4Q92544 642 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 IL17FQ96PD4 163 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 C17orf62Q9BQA9 187 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 DHRS4Q9BTZ2 278 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 DERL2Q9GZP9 239 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ACSS3Q9H6R3 686 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF552Q9H707 407 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ZBTB20Q9HC78 741 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 AGPAT4Q9NRZ5 378 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 SLC17A6Q9P2U8 582 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 RUVBL2Q9Y230 463 aaKnown RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 PDE10AQ9Y233 779 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 OSGIN2Q9Y236 505 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 NTNG1Q9Y2I2 539 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 PCSK5Q92824 1860 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 A0A1W2PPV9 198 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 CXorf49A8MYA2 514 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 KLF7O75840 302 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 IPO13O94829 963 aaKnown RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 WISP3O95389 354 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 SYF2O95926 243 aaKnown RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 F7P08709 466 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 ABHD2P08910 425 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 POU3F2P20265 443 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 MAGP20916 626 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 ITGA3P26006 1051 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 CNTFP26441 200 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 IMPA1P29218 277 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 CRABP2P29373 138 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 GRIA3P42263 894 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 GABRA4P48169 554 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 ARSFP54793 590 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 EMP3P54852 163 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 TAS2R39P59534 338 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 RAB10P61026 200 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 USP10Q14694 798 aaKnown RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 ICE2Q659A1 982 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 SP5Q6BEB4 398 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 FIGLAQ6QHK4 219 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 TAOK1Q7L7X3 1001 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 CUZD1Q86UP6 607 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 LRRC56Q8IYG6 542 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 SLC34A3Q8N130 599 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 TCAIMQ8N3R3 496 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 PPM1NQ8N819 430 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 PROKR1Q8TCW9 393 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 DLG3Q92796 817 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 MOCOSQ96EN8 888 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 UBXN10Q96LJ8 280 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF285Q96NJ3 590 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 IP6K3Q96PC2 410 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 MIPEPQ99797 713 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 HAUS8Q9BT25 410 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 SPRTNQ9H040 489 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 CDC42EP4Q9H3Q1 356 aaKnown RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 MRPS30Q9NP92 439 aaKnown RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 CCDC177Q9NQR7 707 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 IRAK4Q9NWZ3 460 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 P4HTMQ9NXG6 502 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 NINJ2Q9NZG7 142 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 STOX2Q9P2F5 926 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 IFT80Q9P2H3 777 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-213ENST00000484112 NDOR1Q9UHB4 597 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 UNC79Q9P2D8 2635 aa9.55□□□□□ -0.88
CPSF4-213ENST00000484112 A0A087WUV0 522 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 OR2A25A4D2G3 310 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 H3BMH7 237 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 TXNDC9O14530 226 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 HNRNPRO43390 633 aaKnown RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 KLHL41O60662 606 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 OR2B3O76000 313 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 IGHEP01854 428 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 ANXA5P08758 320 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 SPTBP11277 2137 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 PRF1P14222 555 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 EZRP15311 586 aaKnown RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 SERPINB9P50453 376 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 DCDP81605 110 aaKnown RBP9.54□□□□□ -0.88
CPSF4-213ENST00000484112 ZIC1Q15915 447 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 PPP1R3AQ16821 1122 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 DEFB110Q30KQ9 67 aa9.54□□□□□ -0.88
CPSF4-213ENST00000484112 CRB2Q5IJ48 1285 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms