RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ATG9BQ674R7 924 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 MED27Q6P2C8 311 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZFP1Q6P2D0 407 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 KIAA1324Q6UXG2 1013 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 VN1R5Q7Z5H4 357 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 FRMD1Q8N878 549 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR2T34Q8NGX1 318 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 SLC5A11Q8WWX8 675 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF583Q96ND8 569 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ANKRD27Q96NW4 1050 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR51B5Q9H339 312 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRDM8Q9NQV8 689 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 GPRC5BQ9NZH0 403 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 SCHIP1Q9P0W5 487 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 EBF1Q9UH73 591 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TAC3Q9UHF0 121 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 NDRG2Q9UN36 371 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 EXO1Q9UQ84 846 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TMED5Q9Y3A6 229 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TRBV5-3A0A0A0MS03 114 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 SCN2BO60939 215 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 KCNH1O95259 989 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 EML2O95834 649 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PDGFBP01127 241 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRPS2P11908 318 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 GABRG2P18507 467 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 EFNA1P20827 205 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 KELP23276 732 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 CLNS1AP54105 237 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 WNT3P56703 355 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 MRPS21P82921 87 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 DMPKQ09013 629 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 FXNQ16595 210 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR4F3Q6IEY1 312 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 LCN8Q6JVE9 175 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 HMBOX1Q6NT76 420 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 NXPE4Q6UWF7 544 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF551Q7Z340 670 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 FAM129CQ86XR2 697 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PTRH1Q86Y79 214 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PDSS2Q86YH6 399 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 FAM20CQ8IXL6 584 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PHACTR4Q8IZ21 702 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 DTWD1Q8N5C7 304 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR10A6Q8NH74 314 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 CCL4L1Q8NHW4 92 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 CHTF18Q8WVB6 975 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 FAM3CQ92520 227 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TESCQ96BS2 214 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PDXPQ96GD0 296 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 BMFQ96LC9 184 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 C12orf66Q96MD2 445 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZBTB18Q99592 522 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 KCTD14Q9BQ13 255 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PAIP1Q9H074 479 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 XKR8Q9H6D3 395 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PREBQ9HCU5 417 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 IMP3Q9NV31 184 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ACTR3BQ9P1U1 418 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 BCAP29Q9UHQ4 241 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 GPSM3Q9Y4H4 160 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 DNMT3AQ9Y6K1 912 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TCRBV21S2A2A0A5A6 115 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 GPR89AB7ZAQ6 455 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 PI15O43692 258 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 TIPRLO75663 272 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 CAPNS1P04632 268 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 SLC35G4P0C7Q5 338 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 GPR89BP0CG08 455 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 C7P10643 843 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 LAMP1P11279 417 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 HOXB9P17482 250 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 SLC7A1P30825 629 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 CCR3P51677 355 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ACSM2AQ08AH3 577 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 SLC14A1Q13336 389 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 GRAMD1BQ3KR37 738 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRAMEF14Q5SWL7 426 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRAMEF13Q5VWM6 474 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ACSM2BQ68CK6 577 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ANO7Q6IWH7 933 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 USP30Q70CQ3 517 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 AMIGO2Q86SJ2 522 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 TICAM1Q8IUC6 712 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 SYT12Q8IV01 421 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 LAS2Q8IYD9 372 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 CDC26Q8NHZ8 85 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 HMGB4Q8WW32 186 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZUFSPQ96AP4 578 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 DUS3LQ96G46 650 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 MAGEB10Q96LZ2 347 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 KLHL4Q9C0H6 718 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 REXO4Q9GZR2 422 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 BRF2Q9HAW0 419 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 FZD4Q9ULV1 537 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 TECTAO75443 2155 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 IGKV1-8A0A0C4DH67 115 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 TCRBV5S2A0A599 114 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 GABRR3A8MPY1 467 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms