RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PCDHGA4Q9Y5G9 962 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 TERTO14746 1132 aaKnown RBP19.98■□□□□ 0.79
SEC13-217ENST00000482647 TAPBPO15533 448 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 KATNA1O75449 491 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 STK16O75716 305 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 TUBBP07437 444 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 GNAZP19086 355 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 WT1P19544 449 aaPredicted RBP19.98■□□□□ 0.79
SEC13-217ENST00000482647 HSD17B3P37058 310 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 GCGRP47871 477 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 EMP3P54852 163 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 DCDP81605 110 aaKnown RBP19.98■□□□□ 0.79
SEC13-217ENST00000482647 TSNAXIP1Q2TAA8 658 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 TBC1D19Q8N5T2 526 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 AENQ8WTP8 325 aaKnown RBP19.98■□□□□ 0.79
SEC13-217ENST00000482647 GBP5Q96PP8 586 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 CAPS2Q9BXY5 557 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 PARD6BQ9BYG5 372 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 NLNQ9BYT8 704 aa19.98■□□□□ 0.79
SEC13-217ENST00000482647 DHCR7Q9UBM7 475 aaKnown RBP19.98■□□□□ 0.79
SEC13-217ENST00000482647 SNRNP200O75643 2136 aaKnown RBP19.97■□□□□ 0.79
SEC13-217ENST00000482647 NBEAQ8NFP9 2946 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 PTPRQQ9UMZ3 2332 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 A0A1B0GX78 115 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 ZNF891A8MT65 544 aaPredicted RBP19.97■□□□□ 0.79
SEC13-217ENST00000482647 UBXN8O00124 270 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 RFPL1O75677 317 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 SHBGP04278 402 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 RBP1P09455 135 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 F8A1P23610 371 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 HSPA7P48741 367 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 MC1RQ01726 317 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 PRTGQ2VWP7 1150 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 CATSPEREQ5SY80 951 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 ZNF385CQ66K41 422 aaPredicted RBP19.97■□□□□ 0.79
SEC13-217ENST00000482647 NXPE4Q6UWF7 544 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 PLD6Q8N2A8 252 aaKnown RBP19.97■□□□□ 0.79
SEC13-217ENST00000482647 TMEM79Q9BSE2 394 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 PELI2Q9HAT8 420 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 DNAJC11Q9NVH1 559 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 GPRC5BQ9NZH0 403 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 NDOR1Q9UHB4 597 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 LHX6Q9UPM6 363 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 FARSAQ9Y285 508 aaKnown RBP19.97■□□□□ 0.79
SEC13-217ENST00000482647 SPTBP11277 2137 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 PCM1Q15154 2024 aa19.97■□□□□ 0.79
SEC13-217ENST00000482647 C9J4A7 227 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 MAP2K7O14733 419 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 DSCR3O14972 297 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 RAB40ALP0C0E4 278 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 PTPN4P29074 926 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 CDC16Q13042 620 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 MUM1Q2TAK8 710 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 LCN10Q6JVE6 187 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 STARD8Q92502 1023 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 CAVIN3Q969G5 261 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 SARGQ9BW04 601 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 CD244Q9BZW8 370 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 SYNPO2LQ9H987 977 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 TBK1Q9UHD2 729 aa19.96■□□□□ 0.79
SEC13-217ENST00000482647 TRBC2A0A5B9 178 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 FEZF1A0PJY2 475 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 CCNT2O60583 730 aaKnown RBP19.95■□□□□ 0.78
SEC13-217ENST00000482647 H2AFYO75367 372 aaKnown RBP19.95■□□□□ 0.78
SEC13-217ENST00000482647 CD63P08962 238 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 PIM1P11309 404 aaPredicted RBP19.95■□□□□ 0.78
SEC13-217ENST00000482647 MTHFD2P13995 350 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 GFAPP14136 432 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 BCL6P41182 706 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 MEF2AQ02078 507 aaPredicted RBP19.95■□□□□ 0.78
SEC13-217ENST00000482647 PDK4Q16654 411 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 HKDC1Q2TB90 917 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 NKAIN1Q4KMZ8 207 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 FBXO48Q5FWF7 155 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 GARNL3Q5VVW2 1013 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 TMPRSS11BQ86T26 416 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 TDRPQ86YL5 185 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 SNX31Q8N9S9 440 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 MFSD9Q8NBP5 474 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 CAMKVQ8NCB2 501 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 ESAMQ96AP7 390 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 SCYL1Q96KG9 808 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 AIF1LQ9BQI0 150 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 ACTL8Q9H568 366 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 ZNF358Q9NW07 568 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 IFT80Q9P2H3 777 aaPredicted RBP19.95■□□□□ 0.78
SEC13-217ENST00000482647 GPN3Q9UHW5 284 aaPredicted RBP19.95■□□□□ 0.78
SEC13-217ENST00000482647 RAB21Q9UL25 225 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 RUVBL1Q9Y265 456 aaKnown RBP19.95■□□□□ 0.78
SEC13-217ENST00000482647 MGAQ8IWI9 3026 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 LOC400499M0QZD8 3231 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 ANKRD12Q6UB98 2062 aa19.95■□□□□ 0.78
SEC13-217ENST00000482647 NKX2-8O15522 239 aa19.94■□□□□ 0.78
SEC13-217ENST00000482647 OR1F1O43749 312 aa19.94■□□□□ 0.78
SEC13-217ENST00000482647 LCMT2O60294 686 aaKnown RBP19.94■□□□□ 0.78
SEC13-217ENST00000482647 CREG1O75629 220 aa19.94■□□□□ 0.78
SEC13-217ENST00000482647 RECKO95980 971 aa19.94■□□□□ 0.78
SEC13-217ENST00000482647 CXCR2P25025 360 aa19.94■□□□□ 0.78
SEC13-217ENST00000482647 SLCO1A2P46721 670 aa19.94■□□□□ 0.78
SEC13-217ENST00000482647 ALDH18A1P54886 795 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms