RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SNAI3Q3KNW1 292 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 MOGAT2Q3SYC2 334 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 TAF1BQ53T94 588 aaPredicted RBP4.34□□□□□ -1.71
CALD1-219ENST00000480638 C1orf141Q5JVX7 400 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 SUSD4Q5VX71 490 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 SLC24A5Q71RS6 500 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 LRTM2Q8N967 370 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 SEPT1Q8WYJ6 367 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 GTF3AQ92664 365 aaKnown RBP4.34□□□□□ -1.71
CALD1-219ENST00000480638 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 FER1L6-AS2Q96M78 137 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 FAM218AQ96MZ4 157 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 CDCA3Q99618 268 aaPredicted RBP4.34□□□□□ -1.71
CALD1-219ENST00000480638 EGFL8Q99944 293 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 GTPBP2Q9BX10 602 aaKnown RBP4.34□□□□□ -1.71
CALD1-219ENST00000480638 SDCBP2Q9H190 292 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 NUDT4Q9NZJ9 180 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 THEGQ9P2T0 379 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 ARID2Q68CP9 1835 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 SOCS3O14543 225 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 ELAVL4P26378 380 aaKnown RBP4.33□□□□□ -1.72
CALD1-219ENST00000480638 DCDC1P59894 354 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 NFATC2Q13469 925 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 TRA2AQ13595 282 aaKnown RBP eCLIP4.33□□□□□ -1.72
CALD1-219ENST00000480638 ENPP2Q13822 863 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 MTHFSDQ2M296 383 aaKnown RBP4.33□□□□□ -1.72
CALD1-219ENST00000480638 CES4AQ5XG92 561 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 NOTUMQ6P988 496 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 FRRS1Q6ZNA5 592 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 ERN2Q76MJ5 926 aaKnown RBP4.33□□□□□ -1.72
CALD1-219ENST00000480638 FAM219AQ8IW50 185 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 RCOR2Q8IZ40 523 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 NUP37Q8NFH4 326 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 ANKRD9Q96BM1 317 aaPredicted RBP4.33□□□□□ -1.72
CALD1-219ENST00000480638 PYCR2Q96C36 320 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 OMA1Q96E52 524 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 PRICKLE1Q96MT3 831 aaPredicted RBP4.33□□□□□ -1.72
CALD1-219ENST00000480638 NDNQ99608 321 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 PI4K2AQ9BTU6 479 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 LRRC61Q9BV99 259 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 KATNB1Q9BVA0 655 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 HOXD1Q9GZZ0 328 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 RAVER2Q9HCJ3 691 aaKnown RBP4.33□□□□□ -1.72
CALD1-219ENST00000480638 ELF5Q9UKW6 265 aaPredicted RBP4.33□□□□□ -1.72
CALD1-219ENST00000480638 SELENOKQ9Y6D0 94 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 NOTCH3Q9UM47 2321 aa4.33□□□□□ -1.72
CALD1-219ENST00000480638 MTMR11A4FU01 709 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 C17orf105B2RV13 164 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 PI4K2BG5E9Z4 385 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 PI15O43692 258 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 IDH3BO43837 385 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 CEACAM4O75871 244 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 TCF4P15884 667 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 CETN2P41208 172 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 TMEM50BP56557 158 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 CACNG1Q06432 222 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 ZNF273Q14593 569 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 SLC1A5Q15758 541 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 RBBP7Q16576 425 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 GLIPR1L2Q4G1C9 344 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 OR4C11Q6IEV9 310 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 GPC2Q8N158 579 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 CCAR2Q8N163 923 aaKnown RBP4.32□□□□□ -1.72
CALD1-219ENST00000480638 IQUBQ8NA54 791 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 Q8NBF4 154 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 AQP11Q8NBQ7 271 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 OR5T2Q8NGG2 359 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 KIF18AQ8NI77 898 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 ERP27Q96DN0 273 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 PGM2Q96G03 612 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 BTBD9Q96Q07 612 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 EGLN3Q9H6Z9 239 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 WIPI2Q9Y4P8 454 aa4.32□□□□□ -1.72
CALD1-219ENST00000480638 IL16Q14005 1332 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 EPM2AB3EWF7 344 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 DKC1O60832 514 aaKnown RBP eCLIP4.31□□□□□ -1.72
CALD1-219ENST00000480638 F3P13726 295 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 CD59P13987 128 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 EPORP19235 508 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 PTAFRP25105 342 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 PSMA3P25788 255 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 SFTPDP35247 375 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 ZNF41P51814 821 aaPredicted RBP4.31□□□□□ -1.72
CALD1-219ENST00000480638 LMO4P61968 165 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 FAM174BQ3ZCQ3 159 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
CALD1-219ENST00000480638 C6orf136Q5SQH8 315 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 CYB5D1Q6P9G0 228 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 PAQR6Q6TCH4 344 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 ANKRD33Q7Z3H0 272 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 ABI3BPQ7Z7G0 1075 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 C11orf45Q8TAV5 145 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 FAM222BQ8WU58 562 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 SNRNP27Q8WVK2 155 aaKnown RBP4.31□□□□□ -1.72
CALD1-219ENST00000480638 P2RX5Q93086 422 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 OVOL2Q9BRP0 275 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 PYGO2Q9BRQ0 406 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 NDE1Q9NXR1 346 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 PKD2L2Q9NZM6 624 aa4.31□□□□□ -1.72
CALD1-219ENST00000480638 CFDP1Q9UEE9 299 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms